RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CRHBPP24387 322 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 PPOXP50336 477 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 CCR9P51686 369 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 CCDC58Q4VC31 144 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 LIPNQ5VXI9 398 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 AHSA2Q719I0 299 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 FTMTQ8N4E7 242 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 KLHL36Q8N4N3 616 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 IGFBPL1Q8WX77 278 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 PGAM5Q96HS1 289 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 DIRC2Q96SL1 478 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 TBX5Q99593 518 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 CDCA4Q9BXL8 241 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 OR2J1Q9GZK6 312 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 FAM206AQ9NX38 181 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 ERGIC3Q9Y282 383 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 LOC390937A0A1W2PQ73 354 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 DHRS7CA6NNS2 312 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 H7C417 338 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 M0R233 179 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 SRSF10O75494 262 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF12P17014 697 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 DNASE1P24855 282 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 TGM4P49221 684 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 GBX2P52951 348 aaPredicted RBP12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 TAS2R43P59537 309 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 TIGD6Q17RP2 521 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 C11orf71Q6IPW1 123 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 VHLLQ6RSH7 139 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 PGAP1Q75T13 922 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 PRSS48Q7RTY5 328 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 MRPL21Q7Z2W9 205 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 ELMOD2Q8IZ81 293 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 NEUROG1Q92886 237 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 CCL19Q99731 98 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 ST6GALNAC2Q9UJ37 374 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 GNG8Q9UK08 70 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 LRCH1Q9Y2L9 728 aa12.11□□□□□ -0.47
SUPT16H-208ENST00000557652 PLSCR5A0PG75 271 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 IQCF6A8MYZ5 107 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 PRR32B1ATL7 298 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 OVOL3O00110 214 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 RGS10O43665 173 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 MTRF1O75570 445 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 ADH4P08319 380 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 HTR1AP08908 422 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 BDH1Q02338 343 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 PCGF3Q3KNV8 242 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 BCL2L15Q5TBC7 163 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 ZBTB37Q5TC79 503 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 FAM57BQ71RH2 274 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 LHFPL3Q86UP9 236 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 CATSPERDQ86XM0 798 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 KLBQ86Z14 1044 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 RFLNBQ8N5W9 214 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 CSNK2A3Q8NEV1 391 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 C4orf36Q96KX1 117 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 SIGLEC11Q96RL6 698 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 MND1Q9BWT6 205 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 PBOV1Q9GZY1 135 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 ABCB9Q9NP78 766 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 NKIRAS2Q9NYR9 191 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 DUSP13Q9UII6 198 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 PURGQ9UJV8 347 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 OR52A1Q9UKL2 312 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 POLQO75417 2590 aa12.1□□□□□ -0.47
SUPT16H-208ENST00000557652 A0A1W2PPW3 197 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 MYL12BO14950 172 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 TBX1O43435 398 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 CD8AP01732 235 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 SOD3P08294 240 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 CD53P19397 219 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 OR12D2P58182 307 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 PSG7Q13046 419 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 OR8B8Q15620 311 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
SUPT16H-208ENST00000557652 SNAI3Q3KNW1 292 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms