RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TM9SF3Q9HD45 589 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MRPS30Q9NP92 439 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 C8orf4Q9NR00 106 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 FARSBQ9NSD9 589 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 IMP3Q9NV31 184 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 MS4A12Q9NXJ0 267 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 CCDC167Q9P0B6 97 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ACTR3BQ9P1U1 418 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 STX18Q9P2W9 335 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 SPASTQ9UBP0 616 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TAC3Q9UHF0 121 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SLC7A8Q9UHI5 535 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 BTNL2Q9UIR0 455 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PURGQ9UJV8 347 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 POMPQ9Y244 141 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 BTRCQ9Y297 605 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 NEUROG3Q9Y4Z2 214 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 GVINP1Q7Z2Y8 2422 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MN1Q10571 1320 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 ARHGAP21Q5T5U3 1957 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NCOA6Q14686 2063 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 A0A0A6YYD5 115 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 A0A0J9YY10 115 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LOC100653049A0A140TA62 436 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 A0A1B0GTQ1 180 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TCRBV3S1A0A5B6 114 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TMEM89A2RUT3 159 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LRIT2A6NDA9 550 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PRORSD1PA6NEY8 169 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TLCD2A6NGC4 264 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 OR52A4PA6NMU1 304 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 H0YJX3 145 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PDLIM1O00151 329 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 WWP2O00308 870 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NME4O00746 187 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PLPP1O14494 284 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 AIM2O14862 343 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 CASQ2O14958 399 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 ZW10O43264 779 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 AQP9O43315 295 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 DPM1O60762 260 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 KRT34O76011 436 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 STK17BO94768 372 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ETHE1O95571 254 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 MT-ATP6P00846 226 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 RETP07949 1114 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 GUSBP08236 651 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ANXA4P09525 319 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 SLC35G6P0C7Q6 338 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 CTSEP14091 401 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 UGT2B7P16662 529 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 GPX2P18283 190 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 IL10P22301 178 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 HIST1H1TP22492 207 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 AK4P27144 223 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 CAPZBP47756 277 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ARRB1P49407 418 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 CAV2P51636 162 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 PSME3P61289 254 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 HMGCS1Q01581 520 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 BIKQ13323 160 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FAM53BQ14153 422 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 GAMTQ14353 236 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 GK3PQ14409 553 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 VPS26BQ4G0F5 336 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ANXA8L1Q5VT79 327 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 LIPKQ5VXJ0 399 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FAM71E1Q6IPT2 247 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 RAB12Q6IQ22 244 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NANOGP8Q6NSW7 305 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ERICH5Q6P6B1 374 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TRIM40Q6P9F5 258 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 WDR74Q6RFH5 385 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 FAM159AQ6UWV7 190 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 IL34Q6ZMJ4 242 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 DHDDSQ86SQ9 333 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 CALHM3Q86XJ0 350 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 H1FOOQ8IZA3 346 aaPredicted RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 LIX1Q8N485 282 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 KIF2BQ8N4N8 673 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TRIML2Q8N7C3 387 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 OR9I1Q8NGQ6 314 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 WDR36Q8NI36 951 aaKnown RBP2.43□□□□□ -2.02
VRK1-207ENST00000557352 SFXN5Q8TD22 340 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 SLC37A2Q8TED4 501 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FCGR1BQ92637 280 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 NCLNQ969V3 563 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 MS4A6EQ96DS6 147 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 ITCHQ96J02 903 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 TEX37Q96LM6 180 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 RNF145Q96MT1 663 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 OR2A5Q96R48 311 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 THTPAQ9BU02 230 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 FAIM2Q9BWQ8 316 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 OSBPL10Q9BXB5 764 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 SIRPDQ9H106 197 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 SPNS1Q9H2V7 528 aa2.43□□□□□ -2.02
VRK1-207ENST00000557352 SRMSQ9H3Y6 488 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms