RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 OR10H1Q9Y4A9 318 aa4.24□□□□□ -1.73
ATXN3-247ENST00000557311 PEX16Q9Y5Y5 336 aa4.24□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF780BQ9Y6R6 833 aa4.24□□□□□ -1.73
ATXN3-247ENST00000557311 RAI1Q7Z5J4 1906 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-247ENST00000557311 IGLV3-32A0A0A0MS00 114 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 IGHV4-61A0A0C4DH41 118 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 A0A0J9YW62 118 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 A0A1B0GW55 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 hCG_1809904A0A1W2PP81 198 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 A0A1W2PPE2 198 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 A0A1W2PR64 198 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 A0A1W2PRV1 198 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 CBY3A6NI87 242 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 C17orf51A8MQB3 221 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 SUPT3HB4E1H0 165 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 E7ESA3 106 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 M0QYG6 137 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 SLC28A1O00337 649 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 STX16O14662 325 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ARPC5O15511 151 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 PHGDHO43175 533 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RAD51CO43502 376 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 WBP4O75554 376 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RHBDL1O75783 438 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 UGT2B17O75795 530 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 AKR7A3O95154 331 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 NTN1O95631 604 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 C1QBP02746 253 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 CRYGCP07315 174 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 CTXN2P0C2S0 81 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L2P0CJ85 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L3P0CJ86 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L4P0CJ87 422 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L5P0CJ88 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L6P0CJ89 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4L7P0CJ90 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DAOP14920 347 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF17P17021 662 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF182P17025 639 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 GGT1P19440 569 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TAC1P20366 129 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 NPR2P20594 1047 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 PCMT1P22061 227 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 EEF1B2P24534 225 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ELK3P41970 407 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RPS5P46782 204 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 HEPACAMQ14CZ8 416 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TRAM1Q15629 374 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF628Q5EBL2 1059 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 SLC35D3Q5M8T2 416 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 STEAP4Q687X5 459 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 HBMQ6B0K9 141 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 CLEC6AQ6EIG7 209 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 CGB2Q6NT52 195 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KLHL17Q6TDP4 642 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 Q6ZT83 130 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RASSF6Q6ZTQ3 369 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 NUFIP2Q7Z417 695 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ISCA2Q86U28 154 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MARCH3Q86UD3 253 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MISPQ8IVT2 679 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 GTPBP8Q8N3Z3 284 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 POMGNT2Q8NAT1 580 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 FAM156AQ8NDB6 213 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 OR4N2Q8NGD1 307 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 OR2D3Q8NGH3 330 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 OR4C15Q8NGM1 316 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 WDR20Q8TBZ3 569 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TRMT10AQ8TBZ6 339 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF675Q8TD23 568 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF418Q8TF45 676 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 UBTD2Q8WUN7 234 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MITD1Q8WV92 249 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 C3orf49Q96BT1 292 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TM4SF18Q96CE8 201 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RRNAD1Q96FB5 475 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF681Q96N22 645 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 FOXN4Q96NZ1 517 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 PKP2Q99959 881 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KCTD14Q9BQ13 255 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 INPP5KQ9BT40 448 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TRIM31Q9BZY9 425 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 MIXL1Q9H2W2 232 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 ZMAT3Q9HA38 289 aaKnown RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 SEBOXQ9HB31 216 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-247ENST00000557311 PNPOQ9NVS9 261 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 RDH8Q9NYR8 311 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 TAS2R9Q9NYW1 312 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 NUDT4Q9NZJ9 180 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DNAJB9Q9UBS3 223 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 DUX4Q9UBX2 424 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KIF25Q9UIL4 384 aa4.23□□□□□ -1.73
ATXN3-247ENST00000557311 KLHL21Q9UJP4 597 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms