RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 ZNF670-ZNF695F2Z2N8 137 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 DLGAP1O14490 977 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 SMAD7O15105 426 aaKnown RBP11.57□□□□□ -0.56
SHMT2-228ENST00000557302 XRCC2O43543 280 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 APOL3O95236 402 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ADH4P08319 380 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ANOS1P23352 680 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 MTNR1AP48039 350 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 RIPPLY3P57055 190 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 PSMA6P60900 246 aaKnown RBP11.57□□□□□ -0.56
SHMT2-228ENST00000557302 CXCR4P61073 352 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ROM1Q03395 351 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 SLC34A1Q06495 639 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 FAM209AQ5JX71 171 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 GLYATL3Q5SZD4 288 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 DEGS2Q6QHC5 323 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF322Q6U7Q0 402 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-228ENST00000557302 FAM57BQ71RH2 274 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ENTHD1Q8IYW4 607 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF679Q8IYX0 411 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR5AS1Q8N127 324 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 CIARTQ8N365 385 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF786Q8N393 782 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR8G5Q8NG78 346 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR52H1Q8NGJ2 320 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR2AE1Q8NHA4 323 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 RDH5Q92781 318 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 PGAM5Q96HS1 289 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 Q96MT0 163 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR8B4Q96RC9 309 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 APOL4Q9BPW4 351 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 TTTY10Q9BZA0 68 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 EGLN1Q9GZT9 426 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OR10A2Q9H208 303 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 VCXQ9H320 206 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 OPA3Q9H6K4 179 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 BRD7Q9NPI1 651 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 NKX1-2Q9UD57 310 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-228ENST00000557302 MTORP42345 2549 aa11.57□□□□□ -0.56
SHMT2-228ENST00000557302 PRR32B1ATL7 298 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 LYNX1G3V0Z9 82 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 PSMD9O00233 223 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF254O75437 659 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 OR2T7P0C7T2 308 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 LYNX1P0DP58 116 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 GABRB1P18505 474 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 ACHEP22303 614 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 TNFSF4P23510 183 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 RIDAP52758 137 aaKnown RBP11.56□□□□□ -0.56
SHMT2-228ENST00000557302 PRSS12P56730 875 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 MRPS11P82912 194 aaKnown RBP11.56□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF92Q03936 586 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 CDK5R2Q13319 367 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 TIGD6Q17RP2 521 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 TTC23Q5W5X9 447 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 Q6ZR03 302 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 PRSS45Q7RTY3 260 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 RFLNBQ8N5W9 214 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 BHLHE23Q8NDY6 225 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 OR2Z1Q8NG97 314 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 OR10H4Q8NGA5 316 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 OR2T27Q8NH04 317 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 RHOXF1Q8NHV9 184 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 SPRYD4Q8WW59 207 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-228ENST00000557302 RNFT2Q96EX2 444 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 ELMOD3Q96FG2 381 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 TBX5Q99593 518 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 REPIN1Q9BWE0 567 aaKnown RBP11.56□□□□□ -0.56
SHMT2-228ENST00000557302 RNPEPL1Q9HAU8 725 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 AASSQ9UDR5 926 aa11.56□□□□□ -0.56
SHMT2-228ENST00000557302 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 MED13LQ71F56 2210 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 GGT3PA6NGU5 568 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 CD300LBA8K4G0 201 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 CD55P08174 381 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 INHBBP09529 407 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 CFL1P23528 166 aaKnown RBP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 DCTDP32321 178 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 IL5RAQ01344 420 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 EGR3Q06889 387 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 GFOD2Q3B7J2 385 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF829Q3KNS6 432 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF771Q7L3S4 317 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-228ENST00000557302 DHRSXQ8N5I4 330 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF540Q8NDQ6 660 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 SPSB4Q96A44 273 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 REEP6Q96HR9 211 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
SHMT2-228ENST00000557302 IGHV1-69-2A0A0G2JMI3 117 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 A0A1W2PQL4 384 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ACOD1A6NK06 481 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms