RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KCNJ15Q99712 375 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 ABHD6Q9BV23 337 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 TOR3AQ9H497 397 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 NARFLQ9H6Q4 476 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 CENPMQ9NSP4 180 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 IL19Q9UHD0 177 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 OAZ3Q9UMX2 235 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 ZAR1LA6NP61 321 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 WNT9BO14905 357 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SELENOFO60613 162 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 LMX1BO60663 402 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 MITFO75030 526 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-205ENST00000556310 APOC1P02654 83 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 IGFBP5P24593 272 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 HSD11B1P28845 292 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OPRL1P41146 370 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 PRKXP51817 358 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 RPS7P62081 194 aaKnown RBP9.76□□□□□ -0.85
SLIRP-205ENST00000556310 KPNB1Q14974 876 aaKnown RBP9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SNAI3Q3KNW1 292 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SPRNQ5BIV9 151 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 LCN1P1Q5VSP4 162 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SLX4IPQ5VYV7 408 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 ZFP1Q6P2D0 407 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 PGAP1Q75T13 922 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 RHOUQ7L0Q8 258 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF283Q8N7M2 679 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 LINC01356Q8N9X3 169 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 BBS1Q8NFJ9 593 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OR10AD1Q8NGE0 317 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OTOSQ8NHW6 89 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 ITLN1Q8WWA0 313 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 PYDC1Q8WXC3 89 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 CCL17Q92583 94 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 RAB1CQ92928 201 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OR2V2Q96R30 315 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 CIB1Q99828 191 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SLC30A2Q9BRI3 323 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OSBPL10Q9BXB5 764 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 SEMA6AQ9H2E6 1030 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 TVP23BQ9NYZ1 205 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 LPAR3Q9UBY5 353 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 TMEFF2Q9UIK5 374 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-205ENST00000556310 CDC42EP3Q9UKI2 254 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 WIPI2Q9Y4P8 454 aa9.76□□□□□ -0.85
SLIRP-205ENST00000556310 A6NHS1 94 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 B4DSR2 109 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 MLNRO43193 412 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 XRCC2O43543 280 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 TGFAP01135 160 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 RPLP1P05386 114 aaKnown RBP9.75□□□□□ -0.85
SLIRP-205ENST00000556310 LYNP07948 512 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 ANOS1P23352 680 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 EPHA2P29317 976 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 NAA10P41227 235 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-205ENST00000556310 CX3CR1P49238 355 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 LMO4P61968 165 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 MVKQ03426 396 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF92Q03936 586 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 APOFQ13790 326 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 CHRFAM7AQ494W8 412 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 GLYATL3Q5SZD4 288 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 C12orf73Q69YU5 71 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 SPATC1Q76KD6 591 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 OR2AE1Q8NHA4 323 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 MEGF10Q96KG7 1140 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 AMELYQ99218 206 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 GABARAPL3Q9BY60 117 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 SP140LQ9H930 580 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 NOP16Q9Y3C1 178 aaKnown RBP9.75□□□□□ -0.85
SLIRP-205ENST00000556310 MXRA5Q9NR99 2828 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 ATRQ13535 2644 aa9.75□□□□□ -0.85
SLIRP-205ENST00000556310 C5orf63A6NC05 138 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 CCDC182A6NF36 153 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SAC3D1A6NKF1 404 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 CD300LBA8K4G0 201 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 H3BNX3 289 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 M0R129 80 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 PRKYO43930 277 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 ANXA2P07355 339 aaKnown RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 H2BFMP0C1H6 154 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SLC2A1P11166 492 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SRP9P49458 86 aaKnown RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 DVL1P1P54792 670 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 PEG10Q86TG7 708 aaKnown RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 C10orf67Q8IYJ2 551 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SPRYD4Q8WW59 207 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 RBM4BQ9BQ04 359 aaKnown RBP9.74□□□□□ -0.85
SLIRP-205ENST00000556310 YIPF3Q9GZM5 350 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 SHARPINQ9H0F6 387 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF665Q9H7R5 613 aa9.74□□□□□ -0.85
SLIRP-205ENST00000556310 TMEM106BQ9NUM4 274 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms