RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ANKRD16Q6P6B7 361 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 DOK6Q6PKX4 331 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FAM180AQ6UWF9 173 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RFLNAQ6ZTI6 216 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TMED4Q7Z7H5 227 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MRGPREQ86SM8 312 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OOSP2Q86WS3 158 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ERI1Q8IV48 349 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GLB1L2Q8IW92 636 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BOLLQ8N9W6 283 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF383Q8NA42 475 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MFSD9Q8NBP5 474 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GPR26Q8NDV2 337 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ATP6V1C2Q8NEY4 427 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FDCSPQ8NFU4 85 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OR6N1Q8NGY5 312 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZFP28Q8NHY6 868 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LGALS14Q8TCE9 139 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TRMT61AQ96FX7 289 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TIMD4Q96H15 378 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RASL10BQ96S79 203 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FEVQ99581 238 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SLC30A3Q99726 388 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TMPRSS13Q9BYE2 586 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 UCK2Q9BZX2 261 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ALG9Q9H6U8 611 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RETNQ9HD89 108 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 Q9N2K0 584 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FGF21Q9NSA1 209 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 DCAF13Q9NV06 445 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LYARQ9NX58 379 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GLTPQ9NZD2 209 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FBXL4Q9UKA2 621 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZDHHC8Q9ULC8 765 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ICAM5Q9UMF0 924 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TCF19Q9Y242 345 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF835Q9Y2P0 537 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MRPS28Q9Y2Q9 187 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 USP9XQ93008 2570 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SPTA1P02549 2419 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 IGLV3-12A0A075B6K2 115 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PPIAL4EA0A075B759 164 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM213A2RRL7 107 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ANKUB1A6NFN9 424 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 G3V3Y1 287 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 CYB5BO43169 146 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PLPP2O43688 288 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 SYNGR3O43761 229 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 SSNA1O43805 119 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 MFSD11O43934 449 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 CA11O75493 328 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 SCRG1O75711 98 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PROSCO94903 275 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 AP2A2O94973 939 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 IFNA10P01566 189 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PPIAL4FP0DN26 164 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 OMGP23515 440 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 UQCRC1P31930 480 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 SSTR5P35346 364 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PRLHRP49683 370 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 VEGFCP49767 419 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PDLIM4P50479 330 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 DAP3P51398 398 aaKnown RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 RPS15AP62244 130 aaKnown RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 RPL11P62913 178 aaKnown RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 C2orf80Q0P641 193 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 HNRNPA0Q13151 305 aaKnown RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF74Q16587 644 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PRTGQ2VWP7 1150 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ARHGAP11BQ3KRB8 267 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 H3F3CQ6NXT2 135 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 LCTLQ6UWM7 567 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 MDGA2Q7Z553 956 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 PPP1R32Q7Z5V6 425 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 TBC1D26Q86UD7 250 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF761Q86XN6 746 aaPredicted RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 C10orf107Q8IVU9 208 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ZADH2Q8N4Q0 377 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 DNAJC22Q8N4W6 341 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 OR6M1Q8NGM8 313 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 OR2Y1Q8NGV0 311 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 OR2T11Q8NH01 316 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 MRAPQ8TCY5 172 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 GNPDA2Q8TDQ7 276 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 GATAD1Q8WUU5 269 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 GGHQ92820 318 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 YIPF6Q96EC8 236 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 SFRP2Q96HF1 295 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 TGM7Q96PF1 710 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 OR52B2Q96RD2 323 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 IL4I1Q96RQ9 567 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF382Q96SR6 550 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 CNN2Q99439 309 aaKnown RBP2.38□□□□□ -2.03
PRPF39-206ENST00000554429 MESP1Q9BRJ9 268 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 H2AFJQ9BTM1 129 aa2.38□□□□□ -2.03
PRPF39-206ENST00000554429 C1orf50Q9BV19 199 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms