RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CCDC92Q53HC0 331 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-208ENST00000553868 YIF1BQ5BJH7 314 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 BCL2L15Q5TBC7 163 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF704Q6ZNC4 412 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-208ENST00000553868 USP43Q70EL4 1123 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF676Q8N7Q3 588 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 OR10S1Q8NGN2 331 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 PHYHIPQ92561 330 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 BCL2L2Q92843 193 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-208ENST00000553868 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 PGLYRP3Q96LB9 341 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 OR2H1Q9GZK4 316 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF281Q9Y2X9 895 aa12.58□□□□□ -0.4
SHMT2-208ENST00000553868 SVEP1Q4LDE5 3571 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 A0A096LPE4 126 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 OR6C6A6NF89 314 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 MSTNO14793 375 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 GPX5O75715 221 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 GATBO75879 557 aaKnown RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 WNT11O96014 354 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 CGAP01215 116 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 COX5BP10606 129 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 CD79AP11912 226 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 COX5AP20674 150 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 NR4A1P22736 598 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 IGHV1-2P23083 117 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 MAPK3P27361 379 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 TPTEP56180 551 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 UBE2NP61088 152 aaKnown RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 PLP2Q04941 152 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 SLC25A35Q3KQZ1 300 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 CATSPERDQ86XM0 798 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 C17orf78Q8N4C9 275 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF283Q8N7M2 679 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 OR1F12Q8NHA8 337 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 ABHD4Q8TB40 342 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 RPL3LQ92901 407 aaKnown RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 KCTD7Q96MP8 289 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 FRRS1LQ9P0K9 344 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF629Q9UEG4 869 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-208ENST00000553868 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
SHMT2-208ENST00000553868 OR4C45A6NMZ5 311 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 GABRPO00591 440 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 DVL2O14641 736 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 SMPD2O60906 423 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 SRSF10O75494 262 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 ARL6IP5O75915 188 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 ZFPL1O95159 310 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 MMP7P09237 267 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 UBCP0CG48 685 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 PAX7P23759 505 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 UGT2B10P36537 528 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 HTR5AP47898 357 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 CX3CR1P49238 355 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 PRKXP51817 358 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 FOXG1P55316 489 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 VBP1P61758 197 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 NCS1P62166 190 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 TUBA1BP68363 451 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 PSG4Q00888 419 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 FABP5Q01469 135 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 WDR38Q5JTN6 314 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 TMEM244Q5VVB8 128 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 DRAM2Q6UX65 266 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 TUBA1AQ71U36 451 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 RELL2Q8NC24 303 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 LINC01560Q8TB33 94 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 HSD17B8Q92506 261 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 PERPQ96FX8 193 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 HDHD5Q9BXW7 423 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 OBP2BQ9NPH6 170 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 TXNL4BQ9NX01 149 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 FAM206AQ9NX38 181 aa12.56□□□□□ -0.4
SHMT2-208ENST00000553868 NUFIP1Q9UHK0 495 aaKnown RBP12.56□□□□□ -0.4
SHMT2-208ENST00000553868 MEGF8Q7Z7M0 2845 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 IQCMA0A1B0GVH7 501 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 M0R135 149 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 SYNGR3O43761 229 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 PNPP00491 289 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 IFNA2P01563 188 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 HLA-HP01893 362 aa12.55□□□□□ -0.4
SHMT2-208ENST00000553868 OTX1P32242 354 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-208ENST00000553868 GALK2Q01415 458 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms