RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PEF1Q9UBV8 284 aaKnown RBP4.11□□□□□ -1.75
ATXN3-218ENST00000553309 IL20RAQ9UHF4 553 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 CD84Q9UIB8 345 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 KIF25Q9UIL4 384 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 SCP2D1Q9UJQ7 156 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 OSGIN1Q9UJX0 560 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 MOKQ9UQ07 419 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 MRPS18CQ9Y3D5 142 aaKnown RBP4.11□□□□□ -1.75
ATXN3-218ENST00000553309 ABCA1O95477 2261 aa4.11□□□□□ -1.75
ATXN3-218ENST00000553309 A0A0J9YWU9 116 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 A0A1W2PQ09 198 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 HYKKA2RU49 373 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR2A25A4D2G3 310 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR52A4PA6NMU1 304 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GABRR3A8MPY1 467 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GAPDHSO14556 408 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 COPEO14579 308 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ARPC5O15511 151 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF749O43361 778 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 PSTPIP1O43586 416 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SUPT7LO94864 414 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 AKR7A3O95154 331 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GPIP06744 558 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 MELTFP08582 738 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 STAG3L2P0CL84 134 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 TAC1P20366 129 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CA4P22748 312 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SHMT2P34897 504 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SPRP35270 261 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GPR1P46091 355 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SLC6A12P48065 614 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 PNLIPRP2P54317 469 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 RAB2AP61019 212 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SIRPAP78324 504 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CX3CL1P78423 397 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 VLDLRP98155 873 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CACNG1Q06432 222 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 MADCAM1Q13477 382 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 IL18R1Q13478 541 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 AQP6Q13520 282 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 IL18Q14116 193 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 P2RY14Q15391 338 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GUCA2BQ16661 112 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 DGUOKQ16854 277 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 NDUFAF6Q330K2 333 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF789Q5FWF6 425 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ANKRD22Q5VYY1 191 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 LCLAT1Q6UWP7 414 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 LRRN1Q6UXK5 716 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 DLEU7Q6UYE1 221 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CYHR1Q6ZMK1 362 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 Q6ZSR9 355 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 HSD11B1LQ7Z5J1 315 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GTSCR1Q86UQ5 136 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CYP4Z1Q86W10 505 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SKA3Q8IX90 412 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SELENOHQ8IZQ5 122 aaKnown RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 PRSS35Q8N3Z0 413 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ATPAF2Q8N5M1 289 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF614Q8N883 585 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 FAM83FQ8NEG4 500 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR4M1Q8NGD0 313 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR13J1Q8NGT2 312 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR2T11Q8NH01 316 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 OR52J3Q8NH60 311 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SETD6Q8TBK2 473 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GLYATL2Q8WU03 294 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 DCAKDQ8WVC6 231 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 C10orf82Q8WW14 230 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 NARS2Q96I59 477 aaKnown RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 PACRGQ96M98 296 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 CPNE1Q99829 537 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 TRIM51Q9BSJ1 452 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 MCRIP2Q9BUT9 160 aaKnown RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 P2RY12Q9H244 342 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 NHEJ1Q9H9Q4 299 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 POPDC2Q9HBU9 364 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF160Q9HCG1 818 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 IL1RAPQ9NPH3 570 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 SDR39U1Q9NRG7 319 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 IMP3Q9NV31 184 aaKnown RBP4.1□□□□□ -1.75
ATXN3-218ENST00000553309 GPATCH2LQ9NWQ4 482 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 MED11Q9P086 117 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 LHX3Q9UBR4 397 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF639Q9UID6 485 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 ZDHHC2Q9UIJ5 367 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 TENM1Q9UKZ4 2725 aa4.1□□□□□ -1.75
ATXN3-218ENST00000553309 hCG_1809904A0A1W2PP81 198 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 A0A1W2PPE2 198 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 A0A1W2PR64 198 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 BTNL10A8MVZ5 291 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 K7EP13 123 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SLC28A1O00337 649 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 BTN3A3O00478 584 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 KLRC4O43908 158 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PRAMEF11O60813 436 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms