RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 INSIG2Q9Y5U4 225 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 AUP1Q9Y679 476 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 SAC3D1A6NKF1 404 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 POM121CA8CG34 1229 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 F5H0A9 414 aaPredicted RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 HLA-DQA2P01906 255 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 SBK2P0C263 348 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 PPIAL4GP0DN37 164 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 KITLGP21583 273 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 PAICSP22234 425 aaKnown RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 CPT2P23786 658 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 SLC25A1P53007 311 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 CRISP1P54107 249 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ESRRGP62508 458 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 TNFAIP6P98066 277 aaPredicted RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 CDK5Q00535 292 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 PAX8Q06710 450 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 AQP6Q13520 282 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 CRMP1Q14194 572 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ARMCX4Q5H9R4 360 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 KDM4DQ6B0I6 523 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF774Q6NX45 483 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ARL9Q6T311 187 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 BCL6BQ8N143 479 aaPredicted RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 KLHL36Q8N4N3 616 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 SLC26A10Q8NG04 563 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 STMN2Q93045 179 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF48Q96MX3 618 aaPredicted RBP9.96□□□□□ -0.82
CKAP4-202ENST00000552828 SIGLEC11Q96RL6 698 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 C1QTNF5Q9BXJ0 243 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 TBCCD1Q9NVR7 557 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 ASH2LQ9UBL3 628 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 POLR1DQ9Y2S0 133 aa9.96□□□□□ -0.82
CKAP4-202ENST00000552828 MITFO75030 526 aaPredicted RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 GPANK1O95872 356 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 COX5BP10606 129 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF823P16415 610 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 TNFRSF1AP19438 455 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 TNFSF4P23510 183 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 PYCR1P32322 319 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 VHLP40337 213 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 BLVRAP53004 296 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 SEC61A1P61619 476 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 BTG1P62324 171 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 IL13RA1P78552 427 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 PAX2Q02962 417 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 BAMBIQ13145 260 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 HNRNPA0Q13151 305 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 ZMYND11Q15326 602 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 OTPQ5XKR4 325 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 Q6ZR03 302 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 C9orf139Q6ZV77 190 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 GJC3Q8NFK1 279 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 OR9Q1Q8NGQ5 310 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 SLC25A28Q96A46 364 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 OTULINQ96BN8 352 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 PLEKHA8Q96JA3 519 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 DCLRE1CQ96SD1 692 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 RBM4BQ9BQ04 359 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 CDADC1Q9BWV3 514 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 NMNAT2Q9BZQ4 307 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 SLITRK2Q9H156 845 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 UNKLQ9H9P5 680 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 SLC25A19Q9HC21 320 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 IL19Q9UHD0 177 aa9.95□□□□□ -0.82
CKAP4-202ENST00000552828 NDRG4Q9ULP0 352 aaKnown RBP9.95□□□□□ -0.82
CKAP4-202ENST00000552828 ARHGAP32A7KAX9 2087 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SURF4O15260 269 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SGCEO43556 437 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 TIMM8AO60220 97 aaPredicted RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 RPSAP08865 295 aaKnown RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SPI1P17947 270 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 FMO3P31513 532 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 CD80P33681 288 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 MDH2P40926 338 aaKnown RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SLC34A1Q06495 639 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 DBPQ10586 325 aaPredicted RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 BLMHQ13867 455 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 PTGES3Q15185 160 aaKnown RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SLC9A3R2Q15599 337 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 SNAPC1Q16533 368 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 MEP1BQ16820 701 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 PDLIM3Q53GG5 364 aaPredicted RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 TMEM236Q5W0B7 351 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 PQLC1Q8N2U9 271 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 OR51L1Q8NGJ5 315 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 OR2AJ1Q8NGZ0 328 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 DACT3Q96B18 629 aaPredicted RBP9.94□□□□□ -0.82
CKAP4-202ENST00000552828 HAVCR1Q96D42 359 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 CIB1Q99828 191 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 MRI1Q9BV20 369 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 PRRG3Q9BZD7 231 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 POFUT1Q9H488 388 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 TVP23BQ9NYZ1 205 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 KCNG2Q9UJ96 466 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 PPP1R3CQ9UQK1 317 aa9.94□□□□□ -0.82
CKAP4-202ENST00000552828 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms