RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LRP5LA4QPB2 252 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 M0R129 80 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 CRLF1O75462 422 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 H2BFMP0C1H6 154 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 SLC2A1P11166 492 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 ZNF16P17020 682 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 ANOS1P23352 680 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 RAD23AP54725 363 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 ZNF92Q03936 586 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 GLYATL3Q5SZD4 288 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 MEPCEQ7L2J0 689 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 OR52H1Q8NGJ2 320 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 OR8J1Q8NGP2 316 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 SPRYD4Q8WW59 207 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 TIMD4Q96H15 378 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 C1orf159Q96HA4 380 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 OR2V2Q96R30 315 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 MNTQ99583 582 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 SLC22A4Q9H015 551 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 HAO2Q9NYQ3 351 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 H2AFY2Q9P0M6 372 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 KLHDC2Q9Y2U9 406 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 NOP16Q9Y3C1 178 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 CACNG2Q9Y698 323 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 TMEM14AQ9Y6G1 99 aa13.06□□□□□ -0.32
PRPF40B-211ENST00000551063 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 ANXA2P07355 339 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 PSMA6P60900 246 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CDC42P60953 191 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 KCTD18Q6PI47 426 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 DEGS2Q6QHC5 323 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 PRSS45Q7RTY3 260 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CBR4Q8N4T8 237 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 BHLHE23Q8NDY6 225 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 OR10AD1Q8NGE0 317 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 OR2AE1Q8NHA4 323 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 ITLN1Q8WWA0 313 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 ASB17Q8WXJ9 295 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CCL17Q92583 94 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 RAB1CQ92928 201 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 STMN2Q93045 179 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 MDFIQ99750 246 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 RGCCQ9H4X1 137 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 TMEM100Q9NV29 134 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 TMEM160Q9NX00 188 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 WIPI2Q9Y4P8 454 aa13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-211ENST00000551063 C5orf63A6NC05 138 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 PHYHO14832 338 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 MLNRO43193 412 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 TBX1O43435 398 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 MRPL3P09001 348 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 IL2RGP31785 369 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 DDOSTP39656 456 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 CDH15P55291 814 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 PRSS12P56730 875 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 TIGD6Q17RP2 521 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 FAM166AQ6J272 317 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 LRRN1Q6UXK5 716 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 BCDIN3DQ7Z5W3 292 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 TRUB1Q8WWH5 349 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 MEGF10Q96KG7 1140 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 ADGRL4Q9HBW9 690 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 TMEM106BQ9NUM4 274 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 DNAJC27Q9NZQ0 273 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 MRPL15Q9P015 296 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 WARS2Q9UGM6 360 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
PRPF40B-211ENST00000551063 LOC100289279A0A1B0GTE1 492 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 E9PQ18 207 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 HTR1FP30939 366 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 DCTDP32321 178 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 GATA4P43694 442 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 MMP16P51512 607 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 ROM1Q03395 351 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 MVKQ03426 396 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 POU4F2Q12837 409 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 TMED1Q13445 227 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 FAM57BQ71RH2 274 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 PEG10Q86TG7 708 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms