RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 E9PQ18 207 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 APOC1P02654 83 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 SBK2P0C263 348 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 SELEP16581 610 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 NR4A2P43354 598 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 CXCR4P61073 352 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 SNRPGP62308 76 aaKnown RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 TNFAIP6P98066 277 aaPredicted RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 CDK5R2Q13319 367 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 TIGD6Q17RP2 521 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 SPRNQ5BIV9 151 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 KCTD18Q6PI47 426 aaPredicted RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 Q71RC1 249 aaPredicted RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 RHOUQ7L0Q8 258 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 ZNF555Q8NEP9 628 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 OR8G5Q8NG78 346 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 OR10H4Q8NGA5 316 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 ELMOD3Q96FG2 381 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 MROQ9BYG7 248 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 EGLN1Q9GZT9 426 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 OR10A2Q9H208 303 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 HAO2Q9NYQ3 351 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 CGGBP1Q9UFW8 167 aaPredicted RBP11.68□□□□□ -0.54
TROAP-213ENST00000550709 ZDHHC8Q9ULC8 765 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 CACNG2Q9Y698 323 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 IGHV1-69-2A0A0G2JMI3 117 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 ZNF670-ZNF695F2Z2N8 137 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 H0YL77 283 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 NDUFS8O00217 210 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 DLGAP1O14490 977 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 PPIHO43447 177 aaKnown RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 HLA-DPB1P04440 258 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 TNFSF4P23510 183 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 CLEC9AQ6UXN8 241 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 PRSS45Q7RTY3 260 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 ENTHD1Q8IYW4 607 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 OR13G1Q8NGZ3 307 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 CCL17Q92583 94 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 SGK3Q96BR1 496 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 RNFT2Q96EX2 444 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 REEP6Q96HR9 211 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 OR8B4Q96RC9 309 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 DIRC2Q96SL1 478 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 SP140LQ9H930 580 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 ZNF275Q9NSD4 429 aaPredicted RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 TMEM100Q9NV29 134 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
TROAP-213ENST00000550709 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
TROAP-213ENST00000550709 IGHV4-61A0A0C4DH41 118 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 TMEM269A0A1B0GVZ9 245 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
TROAP-213ENST00000550709 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 H0YHG0 523 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 SLC16A6O15403 523 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 XRCC2O43543 280 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 CLIC3O95833 236 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 LY6G6DO95868 133 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 ACHEP22303 614 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 MTNR1AP48039 350 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 RIDAP52758 137 aaKnown RBP11.66□□□□□ -0.54
TROAP-213ENST00000550709 PSMA6P60900 246 aaKnown RBP11.66□□□□□ -0.54
TROAP-213ENST00000550709 IL5RAQ01344 420 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 ROM1Q03395 351 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 POU4F2Q12837 409 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 TMED1Q13445 227 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 RIN1Q13671 783 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 OCLNQ16625 522 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 SLC25A30Q5SVS4 291 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
TROAP-213ENST00000550709 MEDAGQ5VYS4 303 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 PLEKHG7Q6ZR37 379 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 SSX6Q7RTT6 188 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 BIVMQ86UB2 503 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 ZNF679Q8IYX0 411 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 PACRGLQ8N7B6 248 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 ZNF540Q8NDQ6 660 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 OR56B2PQ8NGI1 322 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 OR52H1Q8NGJ2 320 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 RHOXF1Q8NHV9 184 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 ITLN1Q8WWA0 313 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 RDH12Q96NR8 316 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 MNTQ99583 582 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 SLC30A2Q9BRI3 323 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 NARFLQ9H6Q4 476 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 NIPAL2Q9H841 368 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 AMBNQ9NP70 447 aa11.66□□□□□ -0.54
TROAP-213ENST00000550709 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.66□□□□□ -0.54
TROAP-213ENST00000550709 GTF2A1LQ9UNN4 478 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms