RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 POP5Q969H6 163 aaKnown RBP13.69□□□□□ -0.22
VPS29-207ENST00000549970 SSBP3Q9BWW4 388 aaPredicted RBP13.69□□□□□ -0.22
VPS29-207ENST00000549970 DGCR6LQ9BY27 220 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 CENPMQ9NSP4 180 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 UFSP2Q9NUQ7 469 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 N6AMT1Q9Y5N5 214 aa13.69□□□□□ -0.22
VPS29-207ENST00000549970 C5orf63A6NC05 138 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 CD300LBA8K4G0 201 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 ZNF593O00488 134 aaPredicted RBP13.68□□□□□ -0.22
VPS29-207ENST00000549970 IFNGP01579 166 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 RAP2AP10114 183 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 SLC2A1P11166 492 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 IRF2P14316 349 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 CA6P23280 308 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 FPR2P25090 351 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
VPS29-207ENST00000549970 GATA4P43694 442 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 SLC25A1P53007 311 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 RAD23AP54725 363 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 ZNF92Q03936 586 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 OR8G1Q15617 311 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 DRAM2Q6UX65 266 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 SPATC1Q76KD6 591 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 KLBQ86Z14 1044 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 SLAMF6Q96DU3 332 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 NIPSNAP1Q9BPW8 284 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 TMEM246Q9BRR3 403 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 MRI1Q9BV20 369 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 NMNAT2Q9BZQ4 307 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 PPIAL4AQ9Y536 164 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
VPS29-207ENST00000549970 GGT3PA6NGU5 568 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 RIIAD1A6NNX1 92 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 FAM20BO75063 409 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 CST1P01037 141 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 ZNF3P17036 446 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 CD200P41217 278 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 GNB2P62879 340 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 IQCF1Q8N6M8 205 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 CELF2-AS1Q8N7Q2 184 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 C19orf18Q8NEA5 215 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 OR11L1Q8NGX0 322 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 TEX47Q8TBZ9 253 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 DVL3Q92997 716 aaPredicted RBP13.67□□□□□ -0.22
VPS29-207ENST00000549970 NEIL1Q96FI4 390 aaPredicted RBP13.67□□□□□ -0.22
VPS29-207ENST00000549970 KCNJ15Q99712 375 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 ADAT1Q9BUB4 502 aaKnown RBP13.67□□□□□ -0.22
VPS29-207ENST00000549970 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 MED20Q9H944 212 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 TAS2R1Q9NYW7 299 aa13.67□□□□□ -0.22
VPS29-207ENST00000549970 FAM183AA6NL82 134 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 ZNF878C9JN71 531 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 H3BN98 237 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
VPS29-207ENST00000549970 MPPED2Q15777 294 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 PCK2Q16822 640 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
VPS29-207ENST00000549970 LINC01590Q5TEZ4 76 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 NLRC3Q7RTR2 1065 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 SIGLECL1Q8N7X8 197 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 ZDHHC22Q8N966 263 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 GIPC3Q8TF64 312 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 GCDHQ92947 438 aaPredicted RBP13.66□□□□□ -0.22
VPS29-207ENST00000549970 ERGIC1Q969X5 290 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 PLEKHA8Q96JA3 519 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 FEVQ99581 238 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 SLC22A4Q9H015 551 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 CMC2Q9NRP2 79 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 NUP50Q9UKX7 468 aa13.66□□□□□ -0.22
VPS29-207ENST00000549970 NOP16Q9Y3C1 178 aaKnown RBP13.66□□□□□ -0.22
VPS29-207ENST00000549970 DHRS12A0PJE2 317 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 ACOT8O14734 319 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 TBX1O43435 398 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 CPT2P23786 658 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 CFPP27918 469 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 CD80P33681 288 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 BLVRAP53004 296 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 PAX8Q06710 450 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 EIF2B1Q14232 305 aaKnown RBP13.65□□□□□ -0.22
VPS29-207ENST00000549970 TEX30Q5JUR7 227 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 LYPD2Q6UXB3 125 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 BTNL3Q6UXE8 466 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
VPS29-207ENST00000549970 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
VPS29-207ENST00000549970 OR56B2PQ8NGI1 322 aa13.65□□□□□ -0.22
VPS29-207ENST00000549970 OR6N2Q8NGY6 317 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms