RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 LRP5LA4QPB2 252 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 BHLHE40O14503 412 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 SEMG1P04279 462 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 HNF4GQ14541 408 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TRMT61AQ96FX7 289 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 LY75O60449 1722 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TUSC2O75896 110 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 ACTL6BO94805 426 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 WNT11O96014 354 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 OPRM1P35372 400 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 OR1D5P58170 312 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 FOXK1P85037 733 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TOMM34Q15785 309 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 B3GNTL1Q67FW5 361 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 LHX8Q68G74 356 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 LYPD8Q6UX82 237 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TFAP2EQ6VUC0 442 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM91Q6ZNR0 172 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 SKA3Q8IX90 412 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 OR5AP2Q8NGF4 316 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 CXorf58Q96LI9 332 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 FBXO34Q9NWN3 711 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 GHRLQ9UBU3 117 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 MDFIC2A0A1B0GVS7 189 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 SIGLEC6O43699 453 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 VAMP5O95183 116 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 HPXP02790 462 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 KITLGP21583 273 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 PTAFRP25105 342 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 ZIC1Q15915 447 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 VWA2Q5GFL6 755 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 ABI3BPQ7Z7G0 1075 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 UHRF2Q96PU4 802 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 PATZ1Q9HBE1 687 aaKnown RBP11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.64
NPC1L1-204ENST00000546276 MCM3APO60318 1980 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 HYAL3O43820 417 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 GABRA1P14867 456 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 IFITM2Q01629 132 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 PPP1R1AQ13522 171 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 PWWP2BQ6NUJ5 590 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 TRAF4Q9BUZ4 470 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 ARGFXA6NJG6 315 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 M0R135 149 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 TPPPO94811 219 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 GUSBP08236 651 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 CAPZBP47756 277 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 LYSMD4Q5XG99 296 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 BVESQ8NE79 360 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 OR4C3Q8NH37 302 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF799Q96GE5 643 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 AKR1E2Q96JD6 320 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 PLEKHF2Q9H8W4 249 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 GDF2Q9UK05 429 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 TBX21Q9UL17 535 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 C7orf66A4D0T2 115 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 CTXN2P0C2S0 81 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 TMEM268Q5VZI3 342 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 LAIR1Q6GTX8 287 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 CHAC2Q8WUX2 184 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 GPR137Q96N19 417 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 SHANK3Q9BYB0 1731 aa11.02□□□□□ -0.65
NPC1L1-204ENST00000546276 TGOLN2O43493 480 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 LAMTOR5O43504 91 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 LANCL1O43813 399 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 PIGPP57054 158 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MZT1Q08AG7 82 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 KLF9Q13886 244 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 PRICKLE4Q2TBC4 344 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 TP53I13Q8NBR0 393 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 OR5M8Q8NGP6 311 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 OR1J1Q8NGS3 322 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MVB12AQ96EY5 273 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 MYO7AQ13402 2215 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 A0A1W2PNR3 127 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 PPP5D1E7EU14 171 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 CTSVO60911 334 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 B3GALNT1O75752 331 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 NTN1O95631 604 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 ICAM2P13598 275 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 NAT1P18440 290 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 FPR2P25090 351 aa11.01□□□□□ -0.65
NPC1L1-204ENST00000546276 CD27P26842 260 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms