RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 INPP5EQ9NRR6 644 aa13.96□□□□□ -0.17
LIMS2-217ENST00000545738 EIF3KQ9UBQ5 218 aaKnown RBP13.96□□□□□ -0.17
LIMS2-217ENST00000545738 SLC22A13Q9Y226 551 aa13.96□□□□□ -0.17
LIMS2-217ENST00000545738 R4GMQ9 66 aa13.96□□□□□ -0.17
LIMS2-217ENST00000545738 TTRP02766 147 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 DCTDP32321 178 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 PSG7Q13046 419 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 IRF3Q14653 427 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 C11orf71Q6IPW1 123 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 RGS7BPQ6MZT1 257 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 STX19Q8N4C7 294 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 ZNF611Q8N823 705 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 SGK3Q96BR1 496 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 SIRT4Q9Y6E7 314 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 IGLV3-9A0A075B6K5 115 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 CYSRT1A8MQ03 144 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 APOBEC3AP31941 199 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 RGS6P49758 472 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 CDH15P55291 814 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 CSNK2BP67870 215 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 SWI5Q1ZZU3 235 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 WDR38Q5JTN6 314 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 CATSPERDQ86XM0 798 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 SYS1Q8N2H4 156 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 MUC15Q8N387 334 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 PBOV1Q9GZY1 135 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 NIPAL2Q9H841 368 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 SCN3BQ9NY72 215 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 LAMP3Q9UQV4 416 aa13.95□□□□□ -0.18
LIMS2-217ENST00000545738 LSM2Q9Y333 95 aaKnown RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 EXOSC1Q9Y3B2 195 aaKnown RBP13.95□□□□□ -0.18
LIMS2-217ENST00000545738 IRGMA1A4Y4 181 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 TBX1O43435 398 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 IGLV3-1P01715 115 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 SERPINF1P36955 418 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 ACTA2P62736 377 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 ACTG2P63267 376 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 ODF4Q2M2E3 257 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 GFOD2Q3B7J2 385 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 MBNL2Q5VZF2 373 aaKnown RBP13.94□□□□□ -0.18
LIMS2-217ENST00000545738 ZNF544Q6NX49 715 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 FBXW12Q6X9E4 464 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 DTX2Q86UW9 622 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
LIMS2-217ENST00000545738 GATAD2BQ8WXI9 593 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 SPSB4Q96A44 273 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 CMBLQ96DG6 245 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 OR5M11Q96RB7 305 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 CDCA4Q9BXL8 241 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 NUFIP1Q9UHK0 495 aaKnown RBP13.94□□□□□ -0.18
LIMS2-217ENST00000545738 DUSP13Q9UII6 198 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 TPRKBQ9Y3C4 175 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 CMAHPQ9Y471 501 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 SPEF1Q9Y4P9 236 aa13.94□□□□□ -0.18
LIMS2-217ENST00000545738 TRIM64A6NGJ6 449 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 LOC110117498-PIK3R3F6TDL0 507 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 H3BSH0 61 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 J3QW42 95 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 MAP2K4P45985 399 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 ARL9Q6T311 187 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 RDH10Q8IZV5 341 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 NANOGP1Q8N7R0 232 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 OR2G2Q8NGZ5 317 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 PGAM5Q96HS1 289 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 TRAF4Q9BUZ4 470 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-217ENST00000545738 REPIN1Q9BWE0 567 aaKnown RBP13.93□□□□□ -0.18
LIMS2-217ENST00000545738 OR52A1Q9UKL2 312 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 GTF2A1LQ9UNN4 478 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 CAB39Q9Y376 341 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-217ENST00000545738 hCG_38984A0A1B0GV85 526 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 MYL12AP19105 171 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 ACKR3P25106 362 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 ALDH3B1P43353 468 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 EFNB3Q15768 340 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 ZNF829Q3KNS6 432 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-217ENST00000545738 OR2T2Q6IF00 324 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 KLBQ86Z14 1044 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 SYNPRQ8TBG9 265 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 OR51E1Q8TCB6 317 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 MYDGFQ969H8 173 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 REEP6Q96HR9 211 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 PLK3Q9H4B4 646 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 PPP1R3EQ9H7J1 279 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 ST6GALNAC2Q9UJ37 374 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 LRCH1Q9Y2L9 728 aa13.93□□□□□ -0.18
LIMS2-217ENST00000545738 A0A1B0GTI1 187 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 RGS10O43665 173 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 IGHV3-13P01766 116 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 CD53P19397 219 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 MMP15P51511 669 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 RPS23P62266 143 aaKnown RBP13.92□□□□□ -0.18
LIMS2-217ENST00000545738 FAM3AP98173 230 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 ZNF718Q3SXZ3 478 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 RNLSQ5VYX0 342 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 FDX2Q6P4F2 183 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 PAMR1Q6UXH9 720 aa13.92□□□□□ -0.18
LIMS2-217ENST00000545738 Q6ZR03 302 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms