RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 RPL35P42766 123 aaKnown RBP7.79□□□□□ -1.16
TDP1-204ENST00000545686 CAV2P51636 162 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 AKR1D1P51857 326 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 AKR1C2P52895 323 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 AKR1C1Q04828 323 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 OR7A5Q15622 319 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 SGCAQ16586 387 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 SLC22A6Q4U2R8 563 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 KLHL24Q6TFL4 600 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 PEG10Q86TG7 708 aaKnown RBP7.79□□□□□ -1.16
TDP1-204ENST00000545686 NAA40Q86UY6 237 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 MISPQ8IVT2 679 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 C9orf40Q8IXQ3 194 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 NUBPLQ8TB37 319 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TMEM234Q8WY98 164 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 MVB12AQ96EY5 273 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
TDP1-204ENST00000545686 NRIP2Q9BQI9 281 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 WWTR1Q9GZV5 400 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TREM1Q9NP99 234 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 RCC2Q9P258 522 aaKnown RBP7.79□□□□□ -1.16
TDP1-204ENST00000545686 CTSFQ9UBX1 484 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 NPIPA1Q9UND3 350 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 FLVCR1Q9Y5Y0 555 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 POMT1Q9Y6A1 747 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TLCD2A6NGC4 264 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ZNF705EA8MWA4 302 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 H0YIZ8 118 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 GMFGO60234 142 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 APOC1P02654 83 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 PMP2P02689 132 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 THEGLP0DJG4 465 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 GNALP38405 381 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 EMP2P54851 167 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 CLDN6P56747 220 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 TFF2Q03403 129 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 SQSTM1Q13501 440 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ZNF542PQ5EBM4 170 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 DAZLQ92904 295 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 TSLPQ969D9 159 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ADAT3Q96EY9 351 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 C5orf66Q9H5L9 145 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ESRP2Q9H6T0 727 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 RNF122Q9H9V4 155 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 PDE7BQ9NP56 450 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ACKR4Q9NPB9 350 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 SOHLH2Q9NX45 425 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 LOC101059948A0A1B0GTJ6 334 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 CSTBP04080 98 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 HIST1H1DP16402 221 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 ZNF93P35789 620 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 NPBWR1P48145 328 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 MEOX2P50222 304 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 EIF3IQ13347 325 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 TSC22D1Q15714 1073 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 TMEM31Q5JXX7 168 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 KIAA0895LQ68EN5 471 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ZNF585AQ6P3V2 769 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 TMEM92Q6UXU6 159 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 Q7L0L9 218 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 SLC29A4Q7RTT9 530 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 KDM8Q8N371 416 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ZNF441Q8N8Z8 693 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 LILRB1Q8NHL6 650 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 RHBDD1Q8TEB9 315 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ST8SIA1Q92185 356 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 TMEM230Q96A57 120 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 SLAMF6Q96DU3 332 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 DNAJA3Q96EY1 480 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 C2orf50Q96LR7 162 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ADAT1Q9BUB4 502 aaKnown RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 LRRC61Q9BV99 259 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 SLC5A7Q9GZV3 580 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 PBOV1Q9GZY1 135 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 LPAR5Q9H1C0 372 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 COPS7AQ9UBW8 275 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
TDP1-204ENST00000545686 FER1L5A0AVI2 2057 aa7.78□□□□□ -1.16
TDP1-204ENST00000545686 TCRBV21S2A2A0A5A6 115 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 MS4A18H0YCH9 400 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 MBTPS2O43462 519 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 WISP1O95388 367 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 IGLV3-19P01714 112 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 HLA-DOBP13765 273 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 GABRG2P18507 467 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 FMODQ06828 376 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 C1orf61Q13536 156 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 GFOD2Q3B7J2 385 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 MS4A18Q3C1V0 323 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 CLEC18BQ6UXF7 455 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 H1FNTQ75WM6 255 aaPredicted RBP7.77□□□□□ -1.17
TDP1-204ENST00000545686 LHFPL1Q86WI0 220 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 OR10H5Q8NGA6 315 aa7.77□□□□□ -1.17
TDP1-204ENST00000545686 KCNG3Q8TAE7 436 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms