RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF629Q9UEG4 869 aaPredicted RBP26.46■■□□□ 1.83
CCM2-219ENST00000544363 FOXJ3Q9UPW0 622 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 PEX16Q9Y5Y5 336 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 MSTNO14793 375 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 ASPHD2Q6ICH7 369 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 LRRTM1Q86UE6 522 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 PLPP7Q8NBV4 271 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 FAM71F1Q96KD3 344 aaPredicted RBP26.45■■□□□ 1.82
CCM2-219ENST00000544363 POM121L2Q96KW2 1035 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 VKORC1Q9BQB6 163 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 SOX7Q9BT81 388 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 C1QTNF5Q9BXJ0 243 aa26.45■■□□□ 1.82
CCM2-219ENST00000544363 NOTOA8MTQ0 251 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 ZNF12P17014 697 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 FSTP19883 344 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 HOXC12P31275 282 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 CASP6P55212 293 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 BHLHA15Q7RTS1 189 aaPredicted RBP26.44■■□□□ 1.82
CCM2-219ENST00000544363 OR1J2Q8NGS2 313 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 SGK3Q96BR1 496 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 FGGYQ96C11 551 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 GFI1Q99684 422 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 CKLFQ9UBR5 152 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 SPTA1P02549 2419 aa26.44■■□□□ 1.82
CCM2-219ENST00000544363 C5orf49A4QMS7 147 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 CTDSP2O14595 271 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 SERPINA5P05154 406 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 BMP5P22003 454 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 S100A5P33763 92 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 APLNRP35414 380 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 PEX19P40855 299 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 TMEM211Q6ICI0 200 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 COLCA1Q6ZS62 124 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 NCCRP1Q6ZVX7 275 aaPredicted RBP26.43■■□□□ 1.82
CCM2-219ENST00000544363 PARP16Q8N5Y8 322 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 WDR31Q8NA23 367 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 DMRTA2Q96SC8 542 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 SLC30A2Q9BRI3 323 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 TAS2R4Q9NYW5 299 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 PKD1L2Q7Z442 2459 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 A0A1W2PR80 420 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 INHBBP09529 407 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 IGFBP3P17936 291 aaPredicted RBP26.43■■□□□ 1.82
CCM2-219ENST00000544363 ADRA2CP18825 462 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 CCNOP22674 350 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 SLC25A35Q3KQZ1 300 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 IDNKQ5T6J7 187 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 Q6ZSR3 168 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 CCDC54Q8NEL0 328 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 OR14K1Q8NGZ2 314 aa26.43■■□□□ 1.82
CCM2-219ENST00000544363 SHANK1Q9Y566 2161 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 TRGV8A0A0C4DH27 118 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 A8MXE2 369 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 MAS1P04201 325 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 EPXP11678 715 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 CCL2P13500 99 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 SERPINA12Q8IW75 414 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 KCTD12Q96CX2 325 aaKnown RBP26.42■■□□□ 1.82
CCM2-219ENST00000544363 ADAT3Q96EY9 351 aaPredicted RBP26.42■■□□□ 1.82
CCM2-219ENST00000544363 MS4A3Q96HJ5 214 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 DAPK2Q9UIK4 370 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 V9GY05 133 aa26.42■■□□□ 1.82
CCM2-219ENST00000544363 ZNF14P17017 642 aaPredicted RBP26.41■■□□□ 1.82
CCM2-219ENST00000544363 CA7P43166 264 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 ACOT12Q8WYK0 555 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 REEP6Q96HR9 211 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 OBP2BQ9NPH6 170 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 ZNF391Q9UJN7 358 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 MEMO1Q9Y316 297 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 V9GYS6 101 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 ATRXP46100 2492 aa26.41■■□□□ 1.82
CCM2-219ENST00000544363 DHRS3O75911 302 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 PSMD7P51665 324 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 MRGPRGQ86SM5 289 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 SLC30A7Q8NEW0 376 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 RGCCQ9H4X1 137 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 RP1L1Q8IWN7 2480 aaPredicted RBP26.4■■□□□ 1.82
CCM2-219ENST00000544363 ACACBO00763 2458 aa26.4■■□□□ 1.82
CCM2-219ENST00000544363 TPRP12270 2363 aaKnown RBP26.4■■□□□ 1.82
CCM2-219ENST00000544363 ANXA2P2A6NMY6 339 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 EEF1E1-BLOC1S5C9J1V9 151 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 RGS5O15539 181 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 EEF1E1O43324 174 aaKnown RBP26.39■■□□□ 1.82
CCM2-219ENST00000544363 MTRF1O75570 445 aaKnown RBP26.39■■□□□ 1.82
CCM2-219ENST00000544363 CBR1P16152 277 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 ZNF20P17024 532 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 IL32P24001 234 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 THBS2P35442 1172 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 GLYATL3Q5SZD4 288 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 MZT2AQ6P582 158 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 OR2AE1Q8NHA4 323 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 S100ZQ8WXG8 99 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 RND1Q92730 232 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 AKIP1Q9NQ31 210 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 CMAHPQ9Y471 501 aa26.39■■□□□ 1.82
CCM2-219ENST00000544363 LOC390937A0A1W2PQ73 354 aa26.39■■□□□ 1.81
CCM2-219ENST00000544363 OR5H1A6NKK0 313 aa26.39■■□□□ 1.81
CCM2-219ENST00000544363 XRCC2O43543 280 aa26.39■■□□□ 1.81
CCM2-219ENST00000544363 SLC2A2P11168 524 aaPredicted RBP26.39■■□□□ 1.81
CCM2-219ENST00000544363 PSMB1P20618 241 aaKnown RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms