RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 NSD2O96028 1365 aa1.33□□□□□ -2.2
CCDC170-203ENST00000544131 AHDC1Q5TGY3 1603 aaPredicted RBP1.33□□□□□ -2.2
CCDC170-203ENST00000544131 TICRRQ7Z2Z1 1910 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 ZSWIM8A7E2V4 1837 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 IGKV1-8A0A0C4DH67 115 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 A0A0J9YXV3 536 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 NCBP2LA6PVI3 153 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 KRBOX1C9JBD0 128 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 ZNF878C9JN71 531 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 NDUFC2-KCTD14E9PQ53 114 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 H7C1H1 209 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 K7EMT4 169 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 PLPP1O14494 284 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 EIF1BO60739 113 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 CDH16O75309 829 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 AQP8O94778 261 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 OR2F2O95006 317 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 CCNB2O95067 398 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 PAHP00439 452 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 LGALS3P17931 250 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 CSNK2A2P19784 350 aaPredicted RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 OR1E1P30953 314 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 TNFSF9P41273 254 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 EIF1P41567 113 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 SYKP43405 635 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 UQCRFS1P47985 274 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 GDI2P50395 445 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 GFERP55789 205 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 RBMY1FQ15415 496 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 RNASE13Q5GAN3 156 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 TTC29Q8NA56 475 aaPredicted RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 GPR26Q8NDV2 337 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 OR9G4Q8NGQ1 327 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 OR10G6Q8NH81 332 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 C17orf50Q8WW18 174 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 MCUR1Q96AQ8 359 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 NRBF2Q96F24 287 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 ZNF317Q96PQ6 595 aaPredicted RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 GSDMAQ96QA5 445 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 XPO6Q96QU8 1125 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 TGS1Q96RS0 853 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 CHP1Q99653 195 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 GGTLC1Q9BX51 225 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 ZYG11BQ9C0D3 744 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 ACTR3CQ9C0K3 210 aaPredicted RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 TMEM38AQ9H6F2 299 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 TMEM185BQ9H7F4 350 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 MRM3Q9HC36 420 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 C8orf17Q9NRJ1 99 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 AGPAT4Q9NRZ5 378 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 LYARQ9NX58 379 aaKnown RBP1.32□□□□□ -2.2
CCDC170-203ENST00000544131 PTTG3PQ9NZH4 202 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 PHLPP2Q6ZVD8 1323 aa1.32□□□□□ -2.2
CCDC170-203ENST00000544131 DENND4AQ7Z401 1863 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 A0A075B6Q4 140 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SMIM26A0A096LP01 95 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 IGHV1-69DA0A0B4J2H0 117 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 IGHV7-4-1A0A0J9YVY3 117 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SERTM2A0A1B0GWG4 89 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 A6NDN8 102 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 DNALI1O14645 258 aaPredicted RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SLC9A3R1O14745 358 aaPredicted RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 POLR1CO15160 346 aaPredicted RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 CHMP2AO43633 222 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 HPRT1P00492 218 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 IGLV3-25P01717 112 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 IGHV3-11P01762 117 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 LOXP28300 417 aaPredicted RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 HMOX2P30519 316 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 RAB7AP51149 207 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 ZNF121P58317 390 aaPredicted RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 TAS2R46P59540 309 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 RPS11P62280 158 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 RPS15P62841 145 aaKnown RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 CYP24A1Q07973 514 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 MERTKQ12866 999 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 NCF4Q15080 339 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 HSDL1Q3SXM5 330 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 YIF1BQ5BJH7 314 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SPANXN2Q5MJ10 180 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 TWF2Q6IBS0 349 aaKnown RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 H3F3CQ6NXT2 135 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SPESP1Q6UW49 350 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 LUZP2Q86TE4 346 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 BBS5Q8N3I7 341 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 TMEM105Q8N8V8 129 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 ST20-AS1Q8NBB2 130 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 CCDC148Q8NFR7 591 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 OR1J4Q8NGS1 313 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 PRRC1Q96M27 445 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 RNF145Q96MT1 663 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SHANK2-AS3Q9BTD1 123 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 ANGPTL4Q9BY76 406 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SLIRPQ9GZT3 109 aaKnown RBP1.31□□□□□ -2.2
CCDC170-203ENST00000544131 RHBDL2Q9NX52 303 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SLC39A1Q9NY26 324 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 C21orf62Q9NYP8 219 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 SLC17A7Q9P2U7 560 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 CBY1Q9Y3M2 126 aa1.31□□□□□ -2.2
CCDC170-203ENST00000544131 TTC41PQ6P2S7 1318 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms