RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FREM3P0C091 2139 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 A0A1W2PNV4 684 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 C5orf51A6NDU8 294 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 ADAM10O14672 748 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 GMFGO60234 142 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 PET100P0DJ07 73 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 PGAM2P15259 253 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 FPR2P25090 351 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 APOBEC1P41238 236 aaKnown RBP12.21□□□□□ -0.46
VPS33A-208ENST00000543633 GFERP55789 205 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 CLDN6P56747 220 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 AIMP2Q13155 320 aaKnown RBP12.21□□□□□ -0.46
VPS33A-208ENST00000543633 BEX5Q5H9J7 111 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 OR52W1Q6IF63 320 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 PRSS54Q6PEW0 395 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 HAGHLQ6PII5 290 aaPredicted RBP12.21□□□□□ -0.46
VPS33A-208ENST00000543633 TTLL10Q6ZVT0 673 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 GVQW1Q8N7I0 195 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.46
VPS33A-208ENST00000543633 OR4K15Q8NH41 348 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 CASTOR1Q8WTX7 329 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 CNTNAP3BQ96NU0 1288 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 AQP10Q96PS8 301 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 SEC11CQ9BY50 192 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 OR11A1Q9GZK7 315 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 NRSN2Q9GZP1 204 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 PBOV1Q9GZY1 135 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.46
VPS33A-208ENST00000543633 SHISA7A6NL88 538 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 GPR31O00270 319 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 SFT2D2O95562 160 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 HEXAP06865 529 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 NME1P15531 152 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 AKR1C4P17516 323 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 FBLP22087 321 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 GNALP38405 381 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 NKAPLQ5M9Q1 402 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 KCTD9Q7L273 389 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 PEG10Q86TG7 708 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 LINC00346Q8IVM7 164 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 NUBPLQ8TB37 319 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 CMBLQ96DG6 245 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 ADAT3Q96EY9 351 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 CYTL1Q9NRR1 136 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 GPR132Q9UNW8 380 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 SMAD9O15198 467 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 WISP1O95388 367 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 HLA-DOBP13765 273 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 ADCYAP1P18509 176 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 PVALBP20472 110 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 OR1D4P47884 311 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 CSNK1EP49674 416 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 EMP2P54851 167 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 HSF1Q00613 529 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 FMODQ06828 376 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 ADPRHL1Q8NDY3 354 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 OCSTAMPQ9BR26 566 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 RNF126Q9BV68 326 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 PHF7Q9BWX1 381 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 LPAR5Q9H1C0 372 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
VPS33A-208ENST00000543633 FLVCR1Q9Y5Y0 555 aa12.2□□□□□ -0.46
VPS33A-208ENST00000543633 CDC14CA4D256 554 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 ETV2O00321 342 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 TAAR5O14804 337 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 ACTL6AO96019 429 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 GNB3P16520 340 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 ZNF20P17024 532 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 ZNF93P35789 620 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 PLEKHN1Q494U1 663 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 RHBDD1Q8TEB9 315 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 DDIT4LQ96D03 193 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 DNAJA3Q96EY1 480 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 CDX2Q99626 313 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 SELENOIQ9C0D9 397 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 SLC2A4RGQ9NR83 387 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 ALKBH4Q9NXW9 302 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 MLXQ9UH92 298 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 SRPK3Q9UPE1 567 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 B3GALT5Q9Y2C3 310 aa12.19□□□□□ -0.46
VPS33A-208ENST00000543633 TDRD6O60522 2096 aaKnown RBP12.19□□□□□ -0.46
VPS33A-208ENST00000543633 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
VPS33A-208ENST00000543633 C17orf51A8MQB3 221 aa12.18□□□□□ -0.46
VPS33A-208ENST00000543633 ZNF878C9JN71 531 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms