RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 ADAT1Q9BUB4 502 aaKnown RBP10.98□□□□□ -0.65
RTN3-213ENST00000543552 MUC13Q9H3R2 512 aa10.98□□□□□ -0.65
RTN3-213ENST00000543552 EGLN3Q9H6Z9 239 aa10.98□□□□□ -0.65
RTN3-213ENST00000543552 PNRC2Q9NPJ4 139 aaKnown RBP10.98□□□□□ -0.65
RTN3-213ENST00000543552 MRPL22Q9NWU5 206 aaKnown RBP10.98□□□□□ -0.65
RTN3-213ENST00000543552 IL20Q9NYY1 176 aa10.98□□□□□ -0.65
RTN3-213ENST00000543552 MRPL15Q9P015 296 aaKnown RBP10.98□□□□□ -0.65
RTN3-213ENST00000543552 ACTR3BQ9P1U1 418 aa10.98□□□□□ -0.65
RTN3-213ENST00000543552 LYVE1Q9Y5Y7 322 aa10.98□□□□□ -0.65
RTN3-213ENST00000543552 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 GGT3PA6NGU5 568 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 CD300LBA8K4G0 201 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 BHLHE40O14503 412 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 ENSAO43768 121 aaKnown RBP10.97□□□□□ -0.65
RTN3-213ENST00000543552 FAM20BO75063 409 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 IFNGP01579 166 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 RNASE1P07998 156 aaKnown RBP10.97□□□□□ -0.65
RTN3-213ENST00000543552 FMO3P31513 532 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 PYCR1P32322 319 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 BPIFB3P59826 476 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 PAX2Q02962 417 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 OR2T33Q8NG76 320 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 OR9Q2Q8NGE9 314 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
RTN3-213ENST00000543552 MAGIXQ9H6Y5 334 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 SP140LQ9H930 580 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 ARL8BQ9NVJ2 186 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 RNF7Q9UBF6 113 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 COMMD3-BMI1R4GMX3 469 aa10.97□□□□□ -0.65
RTN3-213ENST00000543552 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 KIR2DS1A0A191URI9 304 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 ZNF878C9JN71 531 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 NDUFA2O43678 99 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 SPARCP09486 303 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 CA6P23280 308 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 OTX1P32242 354 aaPredicted RBP10.96□□□□□ -0.65
RTN3-213ENST00000543552 MAGEA2P43356 314 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 SLC15A1P46059 708 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 ENTPD1P49961 510 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 GNGT1P63211 74 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 IL13RA1P78552 427 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 MAB21L1Q13394 359 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 DCXRQ7Z4W1 244 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 LNX2Q8N448 690 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 AQP11Q8NBQ7 271 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 TECTBQ96PL2 329 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 NUDT16L1Q9BRJ7 211 aaKnown RBP10.96□□□□□ -0.65
RTN3-213ENST00000543552 BTBD10Q9BSF8 475 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 ZNF747Q9BV97 191 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 REEP1Q9H902 201 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 UFSP2Q9NUQ7 469 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 C14orf119Q9NWQ9 140 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 ERVK-18Q9QC07 812 aa10.96□□□□□ -0.65
RTN3-213ENST00000543552 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
RTN3-213ENST00000543552 TRAV38-1A0A0B4J264 116 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 TVP23AA6NH52 213 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 RIIAD1A6NNX1 92 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 LGALS8O00214 317 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 XRCC2O43543 280 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 PLATP00750 562 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 APOC1P02654 83 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 LIPFP07098 398 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 IGHV4-38-2P0DP08 117 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 ZNF3P17036 446 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 DDOSTP39656 456 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 PSMB10P40306 273 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 PMELP40967 661 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 SLC25A1P53007 311 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 PRSS12P56730 875 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 GRB2P62993 217 aaKnown RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 ZNF92Q03936 586 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 GK3PQ14409 553 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 FAM98BQ52LJ0 330 aaKnown RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 GPR157Q5UAW9 335 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 PRAMEF6Q5VXH4 476 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 WDR25Q64LD2 544 aaPredicted RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 ZNF770Q6IQ21 691 aaPredicted RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 NAA40Q86UY6 237 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 OR6K6Q8NGW6 343 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 DACT3Q96B18 629 aaPredicted RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 SLAMF6Q96DU3 332 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 KCNJ15Q99712 375 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 TSSK6Q9BXA6 273 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 TOR3AQ9H497 397 aa10.95□□□□□ -0.66
RTN3-213ENST00000543552 SAMHD1Q9Y3Z3 626 aaKnown RBP10.95□□□□□ -0.66
RTN3-213ENST00000543552 A6NLC8 198 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 ANKRD30BLA7E2S9 258 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 GASTP01350 101 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 ATP6V1B2P21281 511 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 CFL1P23528 166 aaKnown RBP10.94□□□□□ -0.66
RTN3-213ENST00000543552 HSD11B1P28845 292 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms