RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 AMELYQ99218 206 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 TMEM100Q9NV29 134 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 KCNS2Q9ULS6 477 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
CIT-212ENST00000543239 CCDC182A6NF36 153 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 IFNL4K9M1U5 179 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 WNT9BO14905 357 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 MLNRO43193 412 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 TGFAP01135 160 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SLC2A1P11166 492 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 ALOX5APP20292 161 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 ANOS1P23352 680 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SRP9P49458 86 aaKnown RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 CDH15P55291 814 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 MVKQ03426 396 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 ZNF92Q03936 586 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SPRNQ5BIV9 151 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 AVPI1Q5T686 147 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 PEG10Q86TG7 708 aaKnown RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 TCEANCQ8N8B7 351 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 OR10AD1Q8NGE0 317 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 OR52H1Q8NGJ2 320 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 OR2AE1Q8NHA4 323 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 THEM6Q8WUY1 208 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SPRYD4Q8WW59 207 aaPredicted RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 SPSB4Q96A44 273 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 NARFLQ9H6Q4 476 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 NIPAL2Q9H841 368 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 TMEM106BQ9NUM4 274 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 H2AFY2Q9P0M6 372 aaPredicted RBP13.75□□□□□ -0.21
CIT-212ENST00000543239 LAMP5Q9UJQ1 280 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 CDC42EP3Q9UKI2 254 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 PPP1R3CQ9UQK1 317 aa13.75□□□□□ -0.21
CIT-212ENST00000543239 SLC22A31A6NKX4 558 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 CD300LBA8K4G0 201 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 B4DSR2 109 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 ALPLP05186 524 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 ANXA2P07355 339 aaKnown RBP13.74□□□□□ -0.21
CIT-212ENST00000543239 PRSS12P56730 875 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 LMO4P61968 165 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 AADACL4Q5VUY2 407 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 KCTD18Q6PI47 426 aaPredicted RBP13.74□□□□□ -0.21
CIT-212ENST00000543239 MEPCEQ7L2J0 689 aaKnown RBP13.74□□□□□ -0.21
CIT-212ENST00000543239 PRSS45Q7RTY3 260 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 GID4Q8IVV7 300 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 CELF2-AS1Q8N7Q2 184 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 MEGF10Q96KG7 1140 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 RIBC2Q9H4K1 309 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 USE1Q9NZ43 259 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 LPAR3Q9UBY5 353 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 TMEM14AQ9Y6G1 99 aa13.74□□□□□ -0.21
CIT-212ENST00000543239 SONP18583 2426 aaKnown RBP13.73□□□□□ -0.21
CIT-212ENST00000543239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.73□□□□□ -0.219e-10■■■■□ 24
CIT-212ENST00000543239 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 GGT3PA6NGU5 568 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 H0YL77 283 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 M0R129 80 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 TBX1O43435 398 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 CFL1P23528 166 aaKnown RBP13.73□□□□□ -0.21
CIT-212ENST00000543239 DDOSTP39656 456 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 RAD23AP54725 363 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 ZNF121P58317 390 aaPredicted RBP13.73□□□□□ -0.21
CIT-212ENST00000543239 CHRFAM7AQ494W8 412 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 OR8J1Q8NGP2 316 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 RAB39BQ96DA2 213 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 IL4I1Q96RQ9 567 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 CNN2Q99439 309 aaKnown RBP13.73□□□□□ -0.21
CIT-212ENST00000543239 RGCCQ9H4X1 137 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 S100A14Q9HCY8 104 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 GCM1Q9NP62 436 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 HAO2Q9NYQ3 351 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 DNAJC27Q9NZQ0 273 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 MRPL15Q9P015 296 aaKnown RBP13.73□□□□□ -0.21
CIT-212ENST00000543239 KLHDC2Q9Y2U9 406 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 ORC6Q9Y5N6 252 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 NPTNQ9Y639 398 aa13.73□□□□□ -0.21
CIT-212ENST00000543239 F5H5P2 479 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 EI24O14681 340 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 GMDSO60547 372 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 HLA-DPB1P04440 258 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 MRPL3P09001 348 aaKnown RBP13.72□□□□□ -0.21
CIT-212ENST00000543239 POLR2IP36954 125 aaKnown RBP13.72□□□□□ -0.21
CIT-212ENST00000543239 CD200P41217 278 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 GATA4P43694 442 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 MMP16P51512 607 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 DVL1P1P54792 670 aaPredicted RBP13.72□□□□□ -0.21
CIT-212ENST00000543239 PSMA6P60900 246 aaKnown RBP13.72□□□□□ -0.21
CIT-212ENST00000543239 TIGD6Q17RP2 521 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 ZNF181Q2M3W8 571 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 LRRN1Q6UXK5 716 aa13.72□□□□□ -0.21
CIT-212ENST00000543239 FAM57BQ71RH2 274 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms