RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 COLCA1Q6ZS62 124 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 HIST3H2AQ7L7L0 130 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 SLC30A8Q8IWU4 369 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 LINC00482Q8N8I6 264 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 OR14K1Q8NGZ2 314 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 SLC7A6Q92536 515 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 HIST1H2ACQ93077 130 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 MYDGFQ969H8 173 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 SLC7A6OSQ96CW6 309 aaPredicted RBP3.85□□□□□ -1.79
LIMS1-214ENST00000542845 PANX1Q96RD7 426 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 CCL13Q99616 98 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 CPPED1Q9BRF8 314 aaPredicted RBP3.85□□□□□ -1.79
LIMS1-214ENST00000542845 MCRIP2Q9BUT9 160 aaKnown RBP3.85□□□□□ -1.79
LIMS1-214ENST00000542845 NUF2Q9BZD4 464 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 RAB17Q9H0T7 212 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM100Q9NV29 134 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 TAS2R5Q9NYW4 299 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 RNF7Q9UBF6 113 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 P2RX2Q9UBL9 471 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 DCDC2Q9UHG0 476 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 PRDM4Q9UKN5 801 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 EMCNQ9ULC0 261 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 ANGPT4Q9Y264 503 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 IFT52Q9Y366 437 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 CHST2Q9Y4C5 530 aa3.85□□□□□ -1.79
LIMS1-214ENST00000542845 A0A087WUV0 522 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 IGKV1D-43A0A0B4J1Z2 117 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TRAV38-1A0A0B4J264 116 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 A0A0G2JPF8 293 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 A0A1W2PPM1 405 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 A0A1W2PQ09 198 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 A0A1W2PRG6 482 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 hCG_1807616A0A1W2PRN6 198 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM247A6NEH6 219 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 HNRNPCL2B2RXH8 293 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 HNRNPCL3B7ZW38 293 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 H0YAE9 185 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 LGALS8O00214 317 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 KPNA4O00629 521 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 NDUFA2O43678 99 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 SLC25A17O43808 307 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 DOK2O60496 412 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 HNRNPCL1O60812 293 aaKnown RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 RAMP3O60896 148 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 FCN3O75636 299 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TRMUO75648 421 aaKnown RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 GRPP07492 148 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 HNRNPCL4P0DMR1 293 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ACADSP16219 412 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 HTR2AP28223 471 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 S100A3P33764 101 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 SERPINB5P36952 375 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CDKN2CP42773 168 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 RGS6P49758 472 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CRISP3P54108 245 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CDH12P55289 794 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 DNAJB13P59910 316 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 GMFBP60983 142 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 PCBD1P61457 104 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 NCALDP61601 193 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 BLCAPP62952 87 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ELF3P78545 371 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MRPS34P82930 218 aaKnown RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 IL5RAQ01344 420 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CD47Q08722 323 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MAD2L1Q13257 205 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MAB21L1Q13394 359 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 OR1Q1Q15612 314 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MAPK11Q15759 364 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF181Q2M3W8 571 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 UGT3A2Q3SY77 523 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 SPANXN4Q5MJ08 99 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CLEC12AQ5QGZ9 265 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF529Q6P280 563 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CRIP3Q6Q6R5 217 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 METAP1DQ6UB28 335 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 C10orf99Q6UWK7 81 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TIFABQ6ZNK6 161 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF826PQ6ZT77 177 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 FAM90A1Q86YD7 464 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 C10orf107Q8IVU9 208 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TRIML2Q8N7C3 387 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 Q8N7P7 452 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 NOXO1Q8NFA2 376 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 OR6S1Q8NH40 331 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MZB1Q8WU39 189 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 SLC38A5Q8WUX1 472 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 DNAJA4Q8WW22 397 aaPredicted RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 NABP1Q96AH0 204 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ISOC1Q96CN7 298 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 NMD3Q96D46 503 aaKnown RBP3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM19Q96HH6 336 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF583Q96ND8 569 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 CCDC115Q96NT0 180 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 ECSITQ9BQ95 431 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM120AQ9BXJ8 343 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 MEGF9Q9H1U4 602 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 C12orf10Q9HB07 376 aa3.84□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM27Q9HBJ8 222 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms