RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 HNRNPA1L2Q32P51 320 aaKnown RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 LIPNQ5VXI9 398 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 TCEAL6Q6IPX3 200 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RFLNAQ6ZTI6 216 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SSX9Q7RTT3 188 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZNF595Q8IYB9 648 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 UBALD2Q8IYN6 164 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 BPIFB2Q8N4F0 458 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CDRT4Q8N9R6 151 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CLEC1AQ8NC01 280 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 LFNGQ8NES3 379 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 OR1J1Q8NGS3 322 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 OR5K2Q8NHB8 316 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 GPX8Q8TED1 209 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ASB17Q8WXJ9 295 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 R3HDM4Q96D70 268 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 NUS1Q96E22 293 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZMYND19Q96E35 227 aaPredicted RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 DTD2Q96FN9 168 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 C16orf58Q96GQ5 468 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SMIM8Q96KF7 97 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZNF75AQ96N20 296 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 STACQ99469 402 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PDCD1LG2Q9BQ51 273 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PRSS27Q9BQR3 290 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZNF747Q9BV97 191 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 HCAR1Q9BXC0 346 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PLA2G2FQ9BZM2 168 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 BCL2L14Q9BZR8 327 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ZNF350Q9GZX5 532 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 OR2AG1Q9H205 316 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SYNPO2LQ9H987 977 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ADAP2Q9NPF8 381 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RPS10P5Q9NQ39 176 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PARP11Q9NR21 331 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 SDHAF3Q9NRP4 125 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 DUSP22Q9NRW4 184 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CA14Q9ULX7 337 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 CLEC4EQ9ULY5 219 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 RPH3AQ9Y2J0 694 aaPredicted RBP5.87□□□□□ -1.47
USP28-202ENST00000535607 ZNF337Q9Y3M9 751 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 TMED3Q9Y3Q3 217 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 ADAM18Q9Y3Q7 739 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 PIAS3Q9Y6X2 628 aa5.87□□□□□ -1.47
USP28-202ENST00000535607 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 TMEM272A0A1B0GTI8 110 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 TMEM72A0PK05 275 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 C9orf170A2RU37 121 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 TXNL1O43396 289 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ERI3O43414 337 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 JTBO76095 146 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 AKR7A3O95154 331 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 CD3DP04234 171 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 DCNP07585 359 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 APEHP13798 732 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 IL9P15248 144 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 RPS4Y1P22090 263 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 CPT2P23786 658 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 LAP3P28838 519 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 GRK6P43250 576 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 NPBWR1P48145 328 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PPT1P50897 306 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ZNF136P52737 540 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PDX1P52945 283 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PNLIPRP2P54317 469 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 SKP1P63208 163 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PRDX1Q06830 199 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 DPTQ07507 201 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ENPP2Q13822 863 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ELAVL3Q14576 367 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 ZNHIT3Q15649 155 aaPredicted RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 ZIC1Q15915 447 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ZNF239Q16600 458 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 ZNF658BQ4V348 819 aaPredicted RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 TMEM196Q5HYL7 178 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR2B11Q5JQS5 317 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 LY6G6FQ5SQ64 297 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 HIST2H3PS2Q5TEC6 136 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 EEF1A1P5Q5VTE0 462 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 TMEM215Q68D42 235 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 FAAP20Q6NZ36 180 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PRSS54Q6PEW0 395 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ULK3Q6PHR2 472 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 FIP1L1Q6UN15 594 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 CLEC9AQ6UXN8 241 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 DCXRQ7Z4W1 244 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 PEG10Q86TG7 708 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 LRRTM1Q86UE6 522 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ZNF440Q8IYI8 595 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ARL14Q8N4G2 192 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 COX18Q8N8Q8 333 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 ACOT4Q8N9L9 421 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 CYB561A3Q8NBI2 242 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR4K14Q8NGD5 310 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR56B1Q8NGI3 324 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR6K6Q8NGW6 343 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR10R2Q8NGX6 335 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 OR8S1Q8NH09 359 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms