RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 LCATP04180 440 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 FBP1P09467 338 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 CDKN2AP42771 156 aaKnown RBP12.29□□□□□ -0.44
CTSB-230ENST00000534149 MALLQ13021 153 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
CTSB-230ENST00000534149 PGM2L1Q6PCE3 622 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 MRPL21Q7Z2W9 205 aaKnown RBP12.29□□□□□ -0.44
CTSB-230ENST00000534149 FAM90A1Q86YD7 464 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 OR2T12Q8NG77 320 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 GPX7Q96SL4 187 aaPredicted RBP12.29□□□□□ -0.44
CTSB-230ENST00000534149 PITX2Q99697 317 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 TRIM36Q9NQ86 728 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 ONECUT1Q9UBC0 465 aa12.29□□□□□ -0.44
CTSB-230ENST00000534149 RPUSD1Q9UJJ7 312 aaKnown RBP12.29□□□□□ -0.44
CTSB-230ENST00000534149 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 IGLV1-36A0A0B4J1U3 117 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 A0A0G2JND7 137 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 A0A1B0GVI7 797 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 A0A1B0GW55 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 PTP4A3O75365 173 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 OPN1MWP04001 364 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L2P0CJ85 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L3P0CJ86 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L4P0CJ87 422 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L5P0CJ88 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L6P0CJ89 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L7P0CJ90 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 FXYD6P3P58550 94 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 TRAP1Q12931 704 aaKnown RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 SLC18B1Q6NT16 456 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4L9Q6RFH8 374 aaPredicted RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 RRM2BQ7LG56 351 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 ATF6BQ99941 703 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 SIRT7Q9NRC8 400 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 DNAJB11Q9UBS4 358 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 DUX4Q9UBX2 424 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 TMEM5Q9Y2B1 443 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 NOP16Q9Y3C1 178 aaKnown RBP12.28□□□□□ -0.44
CTSB-230ENST00000534149 KPTNQ9Y664 436 aa12.28□□□□□ -0.44
CTSB-230ENST00000534149 A0A1W2PRD5 423 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 A0A1W2PRF3 423 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 A0A1W2PRM7 423 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 hCG_1807616A0A1W2PRN6 198 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 A6NLC8 198 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 GMDSO60547 372 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 PPP1R3DO95685 299 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 ZNF682O95780 498 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 GRPP07492 148 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 ANOS1P23352 680 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 CRABP1P29762 137 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 TGFBR2P37173 567 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 RPS6KA3P51812 740 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 DLX1P56177 255 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 ELF3P78545 371 aaPredicted RBP12.27□□□□□ -0.45
CTSB-230ENST00000534149 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 COQ5Q5HYK3 327 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 Q6ZTK2 550 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 C11orf44Q8N8P7 122 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 SLC26A10Q8NG04 563 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
CTSB-230ENST00000534149 SRA1Q9HD15 236 aaKnown RBP12.27□□□□□ -0.45
CTSB-230ENST00000534149 PNRC2Q9NPJ4 139 aaKnown RBP12.27□□□□□ -0.45
CTSB-230ENST00000534149 B9D1Q9UPM9 204 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.45
CTSB-230ENST00000534149 CAB39Q9Y376 341 aaPredicted RBP12.27□□□□□ -0.45
CTSB-230ENST00000534149 ANKRD61A6NGH8 418 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 TXNDC12O95881 172 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 NPPAP01160 153 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 GABRA5P31644 462 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 GGT2P36268 569 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 ZNF92Q03936 586 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 ECH1Q13011 328 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 KLRD1Q13241 179 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 IFI44LQ53G44 452 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 METTL21CQ5VZV1 264 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 DPY19L2P2Q6ZN68 376 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 OR6V1Q8N148 313 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 GALNT4Q8N4A0 578 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 PLPP7Q8NBV4 271 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 MRAPQ8TCY5 172 aa12.26□□□□□ -0.45
CTSB-230ENST00000534149 TMEM120AQ9BXJ8 343 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms