RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 KLF14Q8TD94 323 aaPredicted RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 THEM6Q8WUY1 208 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 IPCEF1Q8WWN9 437 aaPredicted RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 YIPF5Q969M3 257 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 SLAMF6Q96DU3 332 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 FAHD2AQ96GK7 314 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 MAP6Q96JE9 813 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 C9orf16Q9BUW7 83 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 TBCCD1Q9NVR7 557 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 IMPAD1Q9NX62 359 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 SLCO1C1Q9NYB5 712 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 STARD10Q9Y365 291 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 LOC105371242A0A075B767 164 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ZAR1LA6NP61 321 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 M0R135 149 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 PRODHO43272 600 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 SPRY3O43610 288 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 RP2O75695 350 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 NCR1O76036 304 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 PNPP00491 289 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 AVPP01185 164 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 PSKH1P11801 424 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ZNF250P15622 560 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 RGS6P49758 472 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ALDH3A2P51648 485 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 CDC42P60953 191 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 MALLQ13021 153 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 RCN1Q15293 331 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 TSTQ16762 297 aaKnown RBP7.39□□□□□ -1.23
COPB1-210ENST00000533533 LRRC36Q1X8D7 754 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 SLC35D3Q5M8T2 416 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 LINC01590Q5TEZ4 76 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 C12orf73Q69YU5 71 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.39□□□□□ -1.23
COPB1-210ENST00000533533 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 OR5AS1Q8N127 324 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 FAM81AQ8TBF8 368 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 TMEM163Q8TC26 289 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 APOBEC3DQ96AK3 386 aaPredicted RBP7.39□□□□□ -1.23
COPB1-210ENST00000533533 CMBLQ96DG6 245 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ZNF799Q96GE5 643 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 MARS2Q96GW9 593 aaKnown RBP7.39□□□□□ -1.23
COPB1-210ENST00000533533 COG8Q96MW5 612 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 JMJD8Q96S16 334 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
COPB1-210ENST00000533533 POFUT1Q9H488 388 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 BRD7Q9NPI1 651 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 G6PC2Q9NQR9 355 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 DNAJC27Q9NZQ0 273 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ATPIF1Q9UII2 106 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 VWFP04275 2813 aa7.39□□□□□ -1.23
COPB1-210ENST00000533533 ZNF878C9JN71 531 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 LCE2BO14633 110 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 TBX1O43435 398 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 IGHV3-13P01766 116 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ALPLP05186 524 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ANXA2P07355 339 aaKnown RBP7.38□□□□□ -1.23
COPB1-210ENST00000533533 LYNP07948 512 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 H2BFMP0C1H6 154 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ACSM4P0C7M7 580 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 SLC2A1P11166 492 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ANPEPP15144 967 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ATP6V1E1P36543 226 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 SLC15A1P46059 708 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ZNF81P51508 661 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 HCCSP53701 268 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 HLXQ14774 488 aaPredicted RBP7.38□□□□□ -1.23
COPB1-210ENST00000533533 TEX30Q5JUR7 227 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 MEPCEQ7L2J0 689 aaKnown RBP7.38□□□□□ -1.23
COPB1-210ENST00000533533 NAA40Q86UY6 237 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 TIGD4Q8IY51 512 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 GALNT4Q8N4A0 578 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 BHLHE23Q8NDY6 225 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 OR10S1Q8NGN2 331 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 GTF3AQ92664 365 aaKnown RBP7.38□□□□□ -1.23
COPB1-210ENST00000533533 TEAD3Q99594 435 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ABHD6Q9BV23 337 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 GABARAPL3Q9BY60 117 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 TTTY10Q9BZA0 68 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 TOR3AQ9H497 397 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 ZNF665Q9H7R5 613 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 MSL2Q9HCI7 577 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 PNRC2Q9NPJ4 139 aaKnown RBP7.38□□□□□ -1.23
COPB1-210ENST00000533533 DECR2Q9NUI1 292 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 USE1Q9NZ43 259 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 LAMP5Q9UJQ1 280 aa7.38□□□□□ -1.23
COPB1-210ENST00000533533 IGLV3-9A0A075B6K5 115 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 A0A0G2JMP0 313 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 A0A0X1KG70 313 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 CCDC182A6NF36 153 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 C17orf100A8MU93 164 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 PSMD9O00233 223 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 PLPP2O43688 288 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 CDC14BO60729 498 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 APOL3O95236 402 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 SLC2A5P22732 501 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 MAGEB1P43366 347 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 CX3CR1P49238 355 aa7.37□□□□□ -1.23
COPB1-210ENST00000533533 GRB2P62993 217 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms