RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CCDC88AQ3V6T2 1871 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF195O14628 629 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 FZD6O60353 706 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DHRS3O75911 302 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LYZL6O75951 148 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 TFAP2AP05549 437 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ALOX5APP20292 161 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 KIR2DL1P43626 348 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 KIR2DL2P43627 348 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 FHITP49789 147 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GNG4P50150 75 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GNB1P62873 340 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZBTB37Q5TC79 503 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 MANEALQ5VSG8 457 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 FAM71E1Q6IPT2 247 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GLIPR1L1Q6UWM5 242 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 WDR88Q6ZMY6 472 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 EMG1Q92979 244 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 TOE1Q96GM8 510 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF385DQ9H6B1 395 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 SDR39U1Q9NRG7 319 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 PSORS1C1Q9UIG5 152 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DIMT1Q9UNQ2 313 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 HS3ST4Q9Y661 456 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 SSC5DA1L4H1 1573 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LRRC30A6NM36 301 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 CDK2AP1O14519 115 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TNFSF14O43557 240 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 FRS3O43559 492 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SPINK4O60575 86 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 DUS4LO95620 317 aaKnown RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 HAND1O96004 215 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 LIMS3P0CW19 117 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 LIMS4P0CW20 117 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TCN2P20062 427 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NPBWR2P48146 333 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 DHODHQ02127 395 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 HHEXQ03014 270 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NCMAPQ5T1S8 102 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SYPL2Q5VXT5 272 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 Q6ZVL8 140 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 OR10AD1Q8NGE0 317 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 OR1L4Q8NGR5 311 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NRG4Q8WWG1 115 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 HSD17B8Q92506 261 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ANAPC16Q96DE5 110 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 WDR92Q96MX6 357 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NAA60Q9H7X0 242 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 WDR76Q9H967 626 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 PIPOXQ9P0Z9 390 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NFS1Q9Y697 457 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 FEZF1A0PJY2 475 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF785A8K8V0 405 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SLC17A3O00476 420 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 PRAMEF11O60813 436 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 MRPL33O75394 65 aaKnown RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 CALCBP10092 127 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ACHEP22303 614 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 CD27P26842 260 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 EPHA2P29317 976 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SRP9P49458 86 aaKnown RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SLC35A1P78382 337 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ALKBH1Q13686 389 aaKnown RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 OR1C1Q15619 314 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SLC35G1Q2M3R5 365 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 FAM182AQ5T1J6 154 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 KMT5CQ86Y97 462 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 RNF113BQ8IZP6 322 aaKnown RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 CLEC4CQ8WTT0 213 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TCTN2Q96GX1 697 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 RNF2Q99496 336 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 PLA2G12AQ9BZM1 189 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SLC35B3Q9H1N7 401 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 DUSP21Q9H596 190 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 PELI2Q9HAT8 420 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SPO11Q9Y5K1 396 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 A0A1W2PN81 502 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TCRBV3S1A0A5B6 114 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 IL5P05113 134 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 GUSBP08236 651 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 IAPPP10997 89 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 NID1P14543 1247 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ACRV1P26436 265 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 CHRNA7P36544 502 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 MMP15P51511 669 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TMEM267Q0VDI3 215 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 SOWAHAQ2M3V2 549 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 GAB4Q2WGN9 574 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 DCAF12L1Q5VU92 463 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 OTUD1Q5VV17 481 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TBPL2Q6SJ96 375 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 TMEFF1Q8IYR6 380 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ATP5SQ99766 215 aa6.6□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF2Q9BSG1 426 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-229ENST00000531014 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms