RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATF6BQ99941 703 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 RPRD1BQ9NQG5 326 aaKnown RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 IL20Q9NYY1 176 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 NOP16Q9Y3C1 178 aaKnown RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 LYVE1Q9Y5Y7 322 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 OR6C68A6NDL8 312 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-212ENST00000527887 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 EI24O14681 340 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 FSHBP01225 129 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 HLA-DQA2P01906 255 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ACSM4P0C7M7 580 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ZNF823P16415 610 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ZFP36P26651 326 aaKnown RBP11.94□□□□□ -0.5
CAPN1-212ENST00000527887 GGT2P36268 569 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 TPTEP56180 551 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 HLXQ14774 488 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 MEP1BQ16820 701 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 MICAQ29983 383 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 OTPQ5XKR4 325 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 FAHD1Q6P587 224 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 CORO6Q6QEF8 472 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 OR5AS1Q8N127 324 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 GALNT4Q8N4A0 578 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 MRI1Q9BV20 369 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 SLC22A4Q9H015 551 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 DCAF16Q9NXF7 216 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ENOPH1Q9UHY7 261 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 ORC6Q9Y5N6 252 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 CDH10Q9Y6N8 788 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 TENM1Q9UKZ4 2725 aa11.94□□□□□ -0.5
CAPN1-212ENST00000527887 TMEM89A2RUT3 159 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 F5H5K5 113 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 DLGAP1O14490 977 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 GPANK1O95872 356 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 WNT2P09544 360 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 ZNF12P17014 697 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 GATA4P43694 442 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 MMP16P51512 607 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.93□□□□□ -0.5
CAPN1-212ENST00000527887 ZNF154Q13106 437 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 TTC23Q5W5X9 447 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 KDM4DQ6B0I6 523 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 RASSF6Q6ZTQ3 369 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-212ENST00000527887 DHRSXQ8N5I4 330 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 DEFB108BQ8NET1 73 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 SDR9C7Q8NEX9 313 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 OR2T4Q8NH00 348 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 GIPC3Q8TF64 312 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 PLEKHA8Q96JA3 519 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 DDOQ99489 341 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 MIOXQ9UGB7 285 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 INSIG2Q9Y5U4 225 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 AUP1Q9Y679 476 aa11.93□□□□□ -0.5
CAPN1-212ENST00000527887 CEACAM18A8MTB9 384 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 BHLHE40O14503 412 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 LCATP04180 440 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 IRF2P14316 349 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 BLVRAP53004 296 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 ACTG1P63261 375 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 SLC35F1Q5T1Q4 408 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 PGAP1Q75T13 922 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 TMEM179BQ7Z7N9 219 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 OR10AD1Q8NGE0 317 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 Q8TCH9 128 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 GCDHQ92947 438 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 DVL3Q92997 716 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 TMEM165Q9HC07 324 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 PNRC2Q9NPJ4 139 aaKnown RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 MMP26Q9NRE1 261 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 DDX28Q9NUL7 540 aaKnown RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
CAPN1-212ENST00000527887 VNN3Q9NY84 501 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 NUP50Q9UKX7 468 aa11.92□□□□□ -0.5
CAPN1-212ENST00000527887 TRAPPC2LH3BP13 241 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 M0R135 149 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 SLC16A6O15403 523 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 MLNRO43193 412 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 CCNB2O95067 398 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 CAPGP40121 348 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 CD200P41217 278 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 IL18R1Q13478 541 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
CAPN1-212ENST00000527887 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms