RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 IQCF6A8MYZ5 107 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 H3BNX3 289 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 M0R129 80 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 XRCC2O43543 280 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 RP2O75695 350 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 BAG2O95816 211 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 TACSTD2P09758 323 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 SLC2A5P22732 501 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 EPHA2P29317 976 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OTX1P32242 354 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OPRL1P41146 370 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 GFOD2Q3B7J2 385 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 SNAI3Q3KNW1 292 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 GLYATL3Q5SZD4 288 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 C6orf52Q5T4I8 152 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 C12orf73Q69YU5 71 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 FAM57BQ71RH2 274 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 RHOUQ7L0Q8 258 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 MEPCEQ7L2J0 689 aaKnown RBP11.36□□□□□ -0.59
CAPN1-209ENST00000527469 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OR52H1Q8NGJ2 320 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OR2AE1Q8NHA4 323 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OR2V2Q96R30 315 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 C9orf16Q9BUW7 83 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 GABARAPL3Q9BY60 117 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 OR10A2Q9H208 303 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 TMEFF2Q9UIK5 374 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-209ENST00000527469 KCNS2Q9ULS6 477 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 PPP1R3CQ9UQK1 317 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
CAPN1-209ENST00000527469 LRRC30A6NM36 301 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 EI24O14681 340 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 LILRA1O75019 489 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 TGFAP01135 160 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 CFL1P23528 166 aaKnown RBP11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ATP6V1E1P36543 226 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ALDH3A2P51648 485 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 CDH15P55291 814 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 PRSS12P56730 875 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ZNF121P58317 390 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ZNF92Q03936 586 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 OR8G1Q15617 311 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 LRRN1Q6UXK5 716 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 Q6ZR03 302 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 CBR4Q8N4T8 237 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 ASB17Q8WXJ9 295 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 RFKQ969G6 155 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 EME1Q96AY2 570 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
CAPN1-209ENST00000527469 AMELYQ99218 206 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 SLC30A2Q9BRI3 323 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 MROQ9BYG7 248 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 SLC22A4Q9H015 551 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 NIPAL2Q9H841 368 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 IKZF2Q9UKS7 526 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 CACNG2Q9Y698 323 aa11.35□□□□□ -0.59
CAPN1-209ENST00000527469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-209ENST00000527469 CD300LBA8K4G0 201 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 ALPLP05186 524 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
CAPN1-209ENST00000527469 ZIK1Q3SY52 487 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-209ENST00000527469 BCDIN3DQ7Z5W3 292 aaKnown RBP11.34□□□□□ -0.59
CAPN1-209ENST00000527469 PQLC1Q8N2U9 271 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 LINC01356Q8N9X3 169 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 OR8J1Q8NGP2 316 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 FAM81AQ8TBF8 368 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 RAB39BQ96DA2 213 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 REEP6Q96HR9 211 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 GAL3ST1Q99999 423 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
CAPN1-209ENST00000527469 CCDC182A6NF36 153 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 ANKRD30BLA7E2S9 258 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 ZNF670-ZNF695F2Z2N8 137 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 F5H5P2 479 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 PHYHO14832 338 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 LMX1BO60663 402 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 HLA-DPB1P04440 258 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 IRF2P14316 349 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 ALOX5APP20292 161 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 HNF1AP20823 631 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 CA6P23280 308 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 IL2RGP31785 369 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 GNALP38405 381 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 HCCSP53701 268 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 POU4F2Q12837 409 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 SNCBQ16143 134 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 AADACL4Q5VUY2 407 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
CAPN1-209ENST00000527469 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-209ENST00000527469 COMMD2Q86X83 199 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms