RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ARF6P62330 175 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 OR8G1Q15617 311 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 OR8B8Q15620 311 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 CYP4Z1Q86W10 505 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 BOLLQ8N9W6 283 aaKnown RBP13.32□□□□□ -0.28
PTPRU-210ENST00000527027 ZSCAN4Q8NAM6 433 aaPredicted RBP13.32□□□□□ -0.28
PTPRU-210ENST00000527027 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 LHX4Q969G2 390 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 PITX2Q99697 317 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 SMURF1Q9HCE7 757 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 SRA1Q9HD15 236 aaKnown RBP13.32□□□□□ -0.28
PTPRU-210ENST00000527027 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 SAR1AQ9NR31 198 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 GMPR2Q9P2T1 348 aaKnown RBP13.32□□□□□ -0.28
PTPRU-210ENST00000527027 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 IGLV1-36A0A0B4J1U3 117 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 TRAV38-1A0A0B4J264 116 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 A0A1W2PRQ8 180 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 CXCR6O00574 342 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 GMDSO60547 372 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 PTBP3O95758 552 aaKnown RBP13.31□□□□□ -0.28
PTPRU-210ENST00000527027 OMPP47874 163 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 DGCR6Q14129 220 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 C11orf91Q3C1V1 193 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 SLC18B1Q6NT16 456 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 CFAP77Q6ZQR2 320 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 TSEN54Q7Z6J9 526 aaKnown RBP13.31□□□□□ -0.28
PTPRU-210ENST00000527027 LDLRAD3Q86YD5 345 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 C1QL4Q86Z23 238 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 SCCPDHQ8NBX0 429 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 SLC26A10Q8NG04 563 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 RSRC1Q96IZ7 334 aaKnown RBP13.31□□□□□ -0.28
PTPRU-210ENST00000527027 HSH2DQ96JZ2 352 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 ATF6BQ99941 703 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 ELAC2Q9BQ52 826 aaKnown RBP13.31□□□□□ -0.28
PTPRU-210ENST00000527027 FAM107BQ9H098 131 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
PTPRU-210ENST00000527027 OOEPA6NGQ2 149 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 UNC119BA6NIH7 251 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 CD300LBA8K4G0 201 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 GSTA4O15217 222 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 SNX3O60493 162 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 CCDC22O60826 627 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 TSPAN15O95858 294 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 TPTEP56180 551 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 LIPEQ05469 1076 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 TRAP1Q12931 704 aaKnown RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 SLC36A3Q495N2 470 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 Q6ZSV7 163 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 BTN2A1Q7KYR7 527 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 MRPL21Q7Z2W9 205 aaKnown RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 ARPINQ7Z6K5 226 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 SLC15A3Q8IY34 581 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 OR2AJ1Q8NGZ0 328 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 FAM110DQ8TAY7 271 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 ERMAPQ96PL5 475 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-210ENST00000527027 C16orf95Q9H693 158 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 CNTD2Q9H8S5 307 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 AURKCQ9UQB9 309 aa13.3□□□□□ -0.28
PTPRU-210ENST00000527027 DVL1O14640 695 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 SERPINA1P01009 418 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 GYPAP02724 150 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 ADAT1Q9BUB4 502 aaKnown RBP13.29□□□□□ -0.28
PTPRU-210ENST00000527027 PNRC2Q9NPJ4 139 aaKnown RBP13.29□□□□□ -0.28
PTPRU-210ENST00000527027 C1orf123Q9NWV4 160 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 KAAG1Q9UBP8 84 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 CYB5R1Q9UHQ9 305 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 ZNF281Q9Y2X9 895 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 ARL2BPQ9Y2Y0 163 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 FAM96BQ9Y3D0 163 aa13.29□□□□□ -0.28
PTPRU-210ENST00000527027 FAM32AQ9Y421 112 aaKnown RBP13.29□□□□□ -0.28
PTPRU-210ENST00000527027 NDUFAB1O14561 156 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 OR10H3O60404 316 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 FCN3O75636 299 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 RENP00797 406 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 GGT2P36268 569 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 C2orf68Q2NKX9 166 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 CDONQ4KMG0 1287 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 CGB2Q6NT52 195 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 ZBTB46Q86UZ6 589 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 GCSAMQ8N6F7 178 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 SPERTQ8NA61 448 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 BCAS4Q8TDM0 211 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 RCN3Q96D15 328 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 NMNAT3Q96T66 252 aa13.28□□□□□ -0.28
PTPRU-210ENST00000527027 RPUSD1Q9UJJ7 312 aaKnown RBP13.28□□□□□ -0.28
PTPRU-210ENST00000527027 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms