RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 EIF4E1BA6NMX2 242 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 PRAC2D3DTV9 90 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 FTCDNL1E5RQL4 147 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 C11orf98E9PRG8 122 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 H3BN98 237 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PLPP3O14495 311 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CDC42EP2O14613 210 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ZNHIT1O43257 154 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 RNF13O43567 381 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 BUB3O43684 328 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 WDR1O75083 606 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 AKR7A3O95154 331 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 VAMP5O95183 116 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ASAH2BP0C7U1 165 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ADORA3P0DMS8 318 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 GABRA1P14867 456 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 BDKRB2P30411 391 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PTGER4P35408 488 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 RPL4P36578 427 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 AQP2P41181 271 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 GSSP48637 474 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 TDGF1P3P51864 188 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 H3F3AP84243 136 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ZP4Q12836 540 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 C1DQ13901 141 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 SNCBQ16143 134 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 C3AR1Q16581 482 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ZNF239Q16600 458 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 CTU2Q2VPK5 515 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 RFX4Q33E94 735 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 MS4A18Q3C1V0 323 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PRR30Q53SZ7 412 aaPredicted RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 OGFRL1Q5TC84 451 aaPredicted RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 SHEQ5VZ18 495 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 KDM4DQ6B0I6 523 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 FAHD1Q6P587 224 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 SMARCD3Q6STE5 483 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PAQR6Q6TCH4 344 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 RASSF6Q6ZTQ3 369 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 KCTD9Q7L273 389 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 P4HA3Q7Z4N8 544 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 SATL1Q86VE3 508 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 SLC43A2Q8N370 569 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 KDM8Q8N371 416 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CBR4Q8N4T8 237 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PACRGLQ8N7B6 248 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 TMEM99Q8N816 258 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 NHLRC2Q8NBF2 726 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ST6GALNAC3Q8NDV1 305 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 OR13C2Q8NGS9 318 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 OR5J2Q8NH18 312 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 FAM57AQ8TBR7 257 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ROBO4Q8WZ75 1007 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CPNE4Q96A23 557 aaPredicted RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 HARBI1Q96MB7 349 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 TMEM68Q96MH6 324 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 FAM210AQ96ND0 272 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 OXGR1Q96P68 337 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 GPA33Q99795 319 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 NIPSNAP1Q9BPW8 284 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 NDEL1Q9GZM8 345 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 GABARAPL1Q9H0R8 117 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 VCXQ9H320 206 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CALHM2Q9HA72 323 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CHST11Q9NPF2 352 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 PNPLA3Q9NST1 481 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 MRPL39Q9NYK5 338 aaKnown RBP3.89□□□□□ -1.79
USP48-211ENST00000526044 TAS2R5Q9NYW4 299 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 IL20Q9NYY1 176 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 USE1Q9NZ43 259 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 KCNS2Q9ULS6 477 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 RASD1Q9Y272 281 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 B3GALT5Q9Y2C3 310 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 POFUT2Q9Y2G5 429 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ZNF835Q9Y2P0 537 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 ASPMQ8IZT6 3477 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CNTRLQ7Z7A1 2325 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 KIAA1549Q9HCM3 1950 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 CACNA1AO00555 2505 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PTPRQQ9UMZ3 2332 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 TRAV27A0A087WT01 109 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 IGHV3-15A0A0B4J1V0 119 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 LOC102725191A0A1B0GVB3 256 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 A0A1W2PRG6 482 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SLC22A20A6NK97 555 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF726A6NNF4 738 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF587BE7ETH6 402 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 H0YJX3 145 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 EI24O14681 340 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SMAD9O15198 467 aaKnown RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 CYTIPO60759 359 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SLC19A2O60779 497 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 MITFO75030 526 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF432O94892 652 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 NDUFB2O95178 105 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 HPRP00739 348 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 TGFAP01135 160 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 HMGN1P05114 100 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms