RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
BDNF-213ENST00000525950 DAP3P51398 398 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 F2RL1P55085 397 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 UCP2P55851 309 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 HHEXQ03014 270 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 FAM109BQ6ICB4 259 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 Q6ZSR6 202 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 DCXRQ7Z4W1 244 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ASB10Q8WXI3 467 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 NECAB3Q96P71 396 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 TAAR9Q96RI9 348 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ADOQ96SZ5 270 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 KCNK17Q96T54 332 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 NKX3-1Q99801 234 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 RTN4RQ9BZR6 473 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 LPAR5Q9H1C0 372 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 UCK1Q9HA47 277 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 COL5A1P20908 1838 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 IGKV3D-11A0A0A0MRZ8 115 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 AHSA1O95433 338 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 CST4P01036 141 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 TTRP02766 147 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 H2BFMP0C1H6 154 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 GNB3P16520 340 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 RCC1P18754 421 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 ADH6P28332 368 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ECI1P42126 302 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 PTGFRP43088 359 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ZNF84P51523 738 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 TMEM268Q5VZI3 342 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 KCNG3Q8TAE7 436 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ZNF721Q8TF20 911 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 CMBLQ96DG6 245 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 MAP3K3Q99759 626 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 GAL3ST1Q99999 423 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 PCDHGA1Q9Y5H4 931 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 MSGN1A6NI15 193 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 C1orf196B1AJZ1 125 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 P2RY10O00398 339 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 SMAD9O15198 467 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 CA11O75493 328 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 DDAH2O95865 285 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 PMP2P02689 132 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 MT-ND4LP03901 98 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 SFTA3P0C7M3 94 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 HIST1H1DP16402 221 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 AGAP20933 346 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 SUPT4H1P63272 117 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 FAM3AP98173 230 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 SLC22A6Q4U2R8 563 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 MARCH3Q86UD3 253 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 ANGPTL5Q86XS5 388 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 TMEM151BQ8IW70 566 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 GPR119Q8TDV5 335 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 SLC25A36Q96CQ1 311 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 MMABQ96EY8 250 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 ZC3H10Q96K80 434 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 RTBDNQ9BSG5 229 aaPredicted RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 GPR27Q9NS67 375 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 OR5AC2Q9NZP5 309 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 PPP4R1LQ9P1A2 415 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 KLHL13Q9P2N7 655 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 METTL1Q9UBP6 276 aaKnown RBP7.11□□□□□ -1.27
BDNF-213ENST00000525950 CACFD1Q9UGQ2 172 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 OSGIN2Q9Y236 505 aa7.11□□□□□ -1.27
BDNF-213ENST00000525950 RPS2P15880 293 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 IL12BP29460 328 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 CSNK1EP49674 416 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 EMP2P54851 167 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 CLDN6P56747 220 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 ZP2Q05996 745 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 SMAD2Q15796 467 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 WNT2BQ93097 391 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 NKD1Q969G9 470 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 MALSU1Q96EH3 234 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 C1orf147Q96MC9 270 aaPredicted RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 TAF9BQ9HBM6 251 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 CUTCQ9NTM9 273 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 MS4A18H0YCH9 400 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 SYT7O43581 403 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 LMX1BO60663 402 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 JTBO76095 146 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 S100A9P06702 114 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 FOXK1P85037 733 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 EBPQ15125 230 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 ELAVL1Q15717 326 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 MS4A18Q3C1V0 323 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 FAM76BQ5HYJ3 339 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 KLHL24Q6TFL4 600 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 OPN5Q6U736 354 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 TMPRSS9Q7Z410 1059 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 ZNF321PQ8N8H1 164 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 MFSD8Q8NHS3 518 aa7.1□□□□□ -1.27
BDNF-213ENST00000525950 EMG1Q92979 244 aaKnown RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 ADAT3Q96EY9 351 aaPredicted RBP7.1□□□□□ -1.27
BDNF-213ENST00000525950 MRGPRX1Q96LB2 322 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms