RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 POFUT1Q9H488 388 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MOB1AQ9H8S9 216 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MSL2Q9HCI7 577 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 BRD7Q9NPI1 651 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM100Q9NV29 134 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 HAO2Q9NYQ3 351 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 LRP12Q9Y561 859 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 PCDHGB1Q9Y5G3 927 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MAST4O15021 2626 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 APCP25054 2843 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ABCA4P78363 2273 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 POLQO75417 2590 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CREBBPQ92793 2442 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 LOC100130705A0A1B0GUX0 176 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM269A0A1B0GVZ9 245 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 DAPL1A0PJW8 107 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 IRGMA1A4Y4 181 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ISPDA4D126 451 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANXA2P2A6NMY6 339 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CD300LBA8K4G0 201 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 LOC110117498-PIK3R3F6TDL0 507 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CDC14BO60729 498 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 MTRF1O75570 445 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 FADS2O95864 444 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 HPXP02790 462 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CD55P08174 381 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ADH4P08319 380 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 TACSTD2P09758 323 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 SBK2P0C263 348 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2T7P0C7T2 308 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 PSKH1P11801 424 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 GIFP27352 417 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 PEX2P28328 305 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 DCTDP32321 178 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CRYBB2P43320 205 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 GZMKP49863 264 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CDH15P55291 814 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM33P57088 247 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CXCR4P61073 352 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACTA2P62736 377 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACTG2P63267 376 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ELF3P78545 371 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 IL5RAQ01344 420 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ROM1Q03395 351 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF92Q03936 586 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 LOXL1Q08397 574 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CDK5R2Q13319 367 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 IL18R1Q13478 541 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 MED21Q13503 144 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OCLNQ16625 522 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 SNAI3Q3KNW1 292 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 BCL2L15Q5TBC7 163 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 PLEKHG7Q6ZR37 379 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 DNM1P46Q6ZS02 220 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF771Q7L3S4 317 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 BCDIN3DQ7Z5W3 292 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 KLBQ86Z14 1044 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 LURAP1LQ8IV03 231 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF679Q8IYX0 411 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 C1orf87Q8N0U7 546 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 DHRSXQ8N5I4 330 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 YIPF7Q8N8F6 280 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 SPERTQ8NA61 448 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CSNK2A3Q8NEV1 391 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR11L1Q8NGX0 322 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2T27Q8NH04 317 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR8S1Q8NH09 359 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2AE1Q8NHA4 323 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CCL17Q92583 94 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 GTF3AQ92664 365 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 HPS1Q92902 700 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ITFG2Q969R8 447 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 RAB39BQ96DA2 213 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 RNFT2Q96EX2 444 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2V2Q96R30 315 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR8B4Q96RC9 309 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 AMELYQ99218 206 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 TBX5Q99593 518 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ADAT1Q9BUB4 502 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 TTTY10Q9BZA0 68 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 BPESC1Q9GZL8 116 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ADGRL4Q9HBW9 690 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 ABCB9Q9NP78 766 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 C14orf119Q9NWQ9 140 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM118AQ9NWS6 357 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL15Q9P015 296 aaKnown RBP4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 IL19Q9UHD0 177 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 PPP1R3CQ9UQK1 317 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 KLHDC2Q9Y2U9 406 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 CRYBG3Q68DQ2 2970 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 DSCAMO60469 2012 aa4.6□□□□□ -1.67
HMGB1P40-201ENST00000525121 A0A0U1RQV5 110 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 A0A1W2PQL4 384 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 METTL15A6NJ78 407 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 A6NLC8 198 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 MYO9AB2RTY4 2548 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 LYNX1G3V0Z9 82 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 PSMD9O00233 223 aa4.59□□□□□ -1.67
HMGB1P40-201ENST00000525121 CASQ2O14958 399 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms