RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 A0A0A6YYJ9 748 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 SGCEO43556 437 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 ANGPTL7O43827 346 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 RAF1P04049 648 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 CD46P15529 392 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 SERPINA2P20848 420 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 PMPCAQ10713 525 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 EIF3IQ13347 325 aaKnown RBP10.36□□□□□ -0.75
PTPRK-216ENST00000524481 FCN2Q15485 313 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 SLC25A53Q5H9E4 307 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 BRICD5Q6PL45 260 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 FDCSPQ8NFU4 85 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 NUDCD2Q8WVJ2 157 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 PNPLA2Q96AD5 504 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 SEC22CQ9BRL7 303 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 NELFAQ9H3P2 528 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 GPR173Q9NS66 373 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 PIGLQ9Y2B2 252 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 LIPGQ9Y5X9 500 aa10.36□□□□□ -0.75
PTPRK-216ENST00000524481 IGLV3-32A0A0A0MS00 114 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 VAMP5O95183 116 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 ALDOBP05062 364 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 UBCP0CG48 685 aaKnown RBP10.35□□□□□ -0.75
PTPRK-216ENST00000524481 GNB3P16520 340 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 GLIPR1L1Q6UWM5 242 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 GVQW1Q8N7I0 195 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 FGFBP3Q8TAT2 258 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 SOSTQ9BQB4 213 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 ZNF69Q9UC07 566 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 LOC100289279A0A1B0GTE1 492 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 A0A1W2PNV4 684 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 C21orf140B9A014 251 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 CTAG2O75638 210 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 IGHMP01871 453 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 CD3DP04234 171 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 FCGR2AP12318 317 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 IL32P24001 234 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 OR3A4PP47883 348 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 CCR9P51686 369 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 H3F3AP84243 136 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 ARFRP1Q13795 201 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 NKAPLQ5M9Q1 402 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 OR52W1Q6IF63 320 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 HDDC2Q7Z4H3 204 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 P4HA3Q7Z4N8 544 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 OR1M1Q8NGA1 313 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 GIMAP1Q8WWP7 306 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 TRIM63Q969Q1 353 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 CREB3L1Q96BA8 519 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 HAVCR1Q96D42 359 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 KCNJ15Q99712 375 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 HRASLSQ9HDD0 168 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 FAM206AQ9NX38 181 aa10.35□□□□□ -0.75
PTPRK-216ENST00000524481 SLC17A2O00624 439 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 ZNF24P17028 368 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 WT1P19544 449 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-216ENST00000524481 PTGS2P35354 604 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 MMP15P51511 669 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 FOXO1Q12778 655 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SNAI3Q3KNW1 292 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 C11orf88Q6PI97 169 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 GGNQ86UU5 652 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 MEIOBQ8N635 442 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 OR52B4Q8NGK2 314 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 OR6F1Q8NGZ6 308 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 PIGCQ92535 297 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 FOXB1Q99853 325 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SLC7A10Q9NS82 523 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 TLN1Q9Y490 2541 aaKnown RBP10.34□□□□□ -0.75
PTPRK-216ENST00000524481 GGT3PA6NGU5 568 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 KLRC4-KLRK1H3BQV0 150 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SP1P08047 785 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 RAB40ALP0C0E4 278 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 MMP16P51512 607 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SOX8P57073 446 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SF3B4Q15427 424 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRK-216ENST00000524481 TSC22D1Q15714 1073 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 CDNFQ49AH0 187 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 ZNF766Q5HY98 468 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 ELMOD2Q8IZ81 293 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 OR51S1Q8NGJ8 323 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 SMIM4Q8WVI0 70 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 NICN1Q9BSH3 213 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 TRBV5-7A0A0A0MS05 114 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 ACHEP22303 614 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 B3GALT5-AS1P59052 145 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 CSRP2Q16527 193 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 PDSS1Q5T2R2 415 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 TMEM104Q8NE00 496 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 NOX3Q9HBY0 568 aa10.34□□□□□ -0.75
PTPRK-216ENST00000524481 MCTS1Q9ULC4 181 aaKnown RBP10.34□□□□□ -0.75
PTPRK-216ENST00000524481 METTL21EPA6NDL7 271 aa10.33□□□□□ -0.76
PTPRK-216ENST00000524481 FARS2O95363 451 aaKnown RBP10.33□□□□□ -0.76
PTPRK-216ENST00000524481 GABRR1P24046 479 aa10.33□□□□□ -0.76
PTPRK-216ENST00000524481 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms