RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OR5V1Q9UGF6 321 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 PPIAL4AQ9Y536 164 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 A0A1B0GWJ7 208 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 LRRC30A6NM36 301 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 CD300LBA8K4G0 201 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF593O00488 134 aaPredicted RBP17.33■□□□□ 0.36
SDCBP-209ENST00000522243 SLC2A1P11166 492 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 SPI1P17947 270 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 CA6P23280 308 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 ENTPD1P49961 510 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 HOXA4Q00056 320 aaPredicted RBP17.33■□□□□ 0.36
SDCBP-209ENST00000522243 TAF13Q15543 124 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 OR8G1Q15617 311 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 MPPED2Q15777 294 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF181Q2M3W8 571 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 GLYATL3Q5SZD4 288 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 C1orf87Q8N0U7 546 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 ZDHHC22Q8N966 263 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 OR2T33Q8NG76 320 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 OR10G2Q8NGC3 310 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 OR6K6Q8NGW6 343 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 FAM216AQ8WUB2 273 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 GCDHQ92947 438 aaPredicted RBP17.33■□□□□ 0.36
SDCBP-209ENST00000522243 DVL3Q92997 716 aaPredicted RBP17.33■□□□□ 0.36
SDCBP-209ENST00000522243 SLAMF6Q96DU3 332 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 LRGUKQ96M69 825 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 NIPSNAP1Q9BPW8 284 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 DGCR6LQ9BY27 220 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF69Q9UC07 566 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 MIOXQ9UGB7 285 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 BAIAP2Q9UQB8 552 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 LRCH1Q9Y2L9 728 aa17.33■□□□□ 0.36
SDCBP-209ENST00000522243 GGT3PA6NGU5 568 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 FAM20BO75063 409 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 IRF2P14316 349 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 CFPP27918 469 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 CD200P41217 278 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 GATA4P43694 442 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 RAD23AP54725 363 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 GNB2P62879 340 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF404Q494X3 552 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 KLF17Q5JT82 389 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-209ENST00000522243 DRAM2Q6UX65 266 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 LYPD2Q6UXB3 125 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 BCL6BQ8N143 479 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-209ENST00000522243 NEIL1Q96FI4 390 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-209ENST00000522243 KCNJ15Q99712 375 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 NMNAT2Q9BZQ4 307 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 MED20Q9H944 212 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 NUP50Q9UKX7 468 aa17.32■□□□□ 0.36
SDCBP-209ENST00000522243 PRPF19Q9UMS4 504 aaKnown RBP17.32■□□□□ 0.36
SDCBP-209ENST00000522243 IGHV3OR16-10A0A075B7F0 116 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 FAM107AO95990 144 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 OTX1P32242 354 aaPredicted RBP17.31■□□□□ 0.36
SDCBP-209ENST00000522243 CD80P33681 288 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 SLC25A1P53007 311 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 IQCF1Q8N6M8 205 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 SIGLECL1Q8N7X8 197 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 BOLLQ8N9W6 283 aaKnown RBP17.31■□□□□ 0.36
SDCBP-209ENST00000522243 OR11L1Q8NGX0 322 aa17.31■□□□□ 0.36
SDCBP-209ENST00000522243 DOCK11Q5JSL3 2073 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 TMEM89A2RUT3 159 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 FAM183AA6NL82 134 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 IFNGP01579 166 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 RAP2AP10114 183 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 PAX8Q06710 450 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 CELF2-AS1Q8N7Q2 184 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 OR8B3Q8NGG8 313 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 TEX47Q8TBZ9 253 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 GIPC3Q8TF64 312 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 OTULINQ96BN8 352 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 ASB9Q96DX5 294 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 DUX5Q96PT3 197 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 OR8B2Q96RD0 313 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 FEVQ99581 238 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 THTPAQ9BU02 230 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 ADAT1Q9BUB4 502 aaKnown RBP17.3■□□□□ 0.36
SDCBP-209ENST00000522243 CHID1Q9BWS9 393 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
SDCBP-209ENST00000522243 RIIAD1A6NNX1 92 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF878C9JN71 531 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 H3BN98 237 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 TBX1O43435 398 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 CST1P01037 141 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 ZNF3P17036 446 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 PITPNBP48739 271 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 UBA52P62987 128 aaKnown RBP17.29■□□□□ 0.36
SDCBP-209ENST00000522243 PAX2Q02962 417 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 EIF2B1Q14232 305 aaKnown RBP17.29■□□□□ 0.36
SDCBP-209ENST00000522243 PCK2Q16822 640 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 LINC01590Q5TEZ4 76 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 SFRP4Q6FHJ7 346 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-209ENST00000522243 BTNL3Q6UXE8 466 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 RBMS3Q6XE24 437 aaKnown RBP17.29■□□□□ 0.36
SDCBP-209ENST00000522243 ADGRG5Q8IZF4 528 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 OR56B2PQ8NGI1 322 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 Q8TCH9 128 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 ERGIC1Q969X5 290 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 PLEKHA8Q96JA3 519 aa17.29■□□□□ 0.36
SDCBP-209ENST00000522243 SLC22A4Q9H015 551 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms