RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TCEANCQ8N8B7 351 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 ZNF454Q8N9F8 522 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 C1orf159Q96HA4 380 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 TEAD3Q99594 435 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 OSBPL10Q9BXB5 764 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 DCAF16Q9NXF7 216 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 KLHDC2Q9Y2U9 406 aa17.47■□□□□ 0.39
TRIM35-203ENST00000521253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■■■□ 26.4
TRIM35-203ENST00000521253 LMX1BO60663 402 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 RBMXP38159 391 aaKnown RBP17.46■□□□□ 0.39
TRIM35-203ENST00000521253 CDH15P55291 814 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 EFNB1P98172 346 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 SLC3A1Q07837 685 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 BCDIN3DQ7Z5W3 292 aaKnown RBP17.46■□□□□ 0.39
TRIM35-203ENST00000521253 LINC01356Q8N9X3 169 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 THEM6Q8WUY1 208 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 TIMD4Q96H15 378 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 REPIN1Q9BWE0 567 aaKnown RBP17.46■□□□□ 0.39
TRIM35-203ENST00000521253 GABARAPL3Q9BY60 117 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 TMEM100Q9NV29 134 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 DNAJC27Q9NZQ0 273 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
TRIM35-203ENST00000521253 KCNS2Q9ULS6 477 aa17.46■□□□□ 0.39
TRIM35-203ENST00000521253 MALRD1Q5VYJ5 2156 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 A0A1B0GWJ7 208 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 CD300LBA8K4G0 201 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 HLA-DPB1P04440 258 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 ANXA2P07355 339 aaKnown RBP17.45■□□□□ 0.38
TRIM35-203ENST00000521253 MRPL3P09001 348 aaKnown RBP17.45■□□□□ 0.38
TRIM35-203ENST00000521253 H2BFMP0C1H6 154 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 HCCSP53701 268 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 LMO4P61968 165 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 SLC16A9Q7RTY1 509 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 PRSS45Q7RTY3 260 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 TMEM163Q8TC26 289 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 SPRYD4Q8WW59 207 aaPredicted RBP17.45■□□□□ 0.38
TRIM35-203ENST00000521253 RAB1CQ92928 201 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 MEGF10Q96KG7 1140 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 RBM4BQ9BQ04 359 aaKnown RBP17.45■□□□□ 0.38
TRIM35-203ENST00000521253 RIBC2Q9H4K1 309 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 TMEM106BQ9NUM4 274 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 TMEM160Q9NX00 188 aa17.45■□□□□ 0.38
TRIM35-203ENST00000521253 FAM157AC9JC47 383 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 F5H5P2 479 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 TBX1O43435 398 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 APOC1P02654 83 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 ALOX5APP20292 161 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 ZNF121P58317 390 aaPredicted RBP17.44■□□□□ 0.38
TRIM35-203ENST00000521253 LCN1P1Q5VSP4 162 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 AADACL4Q5VUY2 407 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 C10orf67Q8IYJ2 551 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 RAB3IPQ96QF0 476 aaPredicted RBP17.44■□□□□ 0.38
TRIM35-203ENST00000521253 IL4I1Q96RQ9 567 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 YIPF3Q9GZM5 350 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 GCM1Q9NP62 436 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 LAMP5Q9UJQ1 280 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 PPP1R3CQ9UQK1 317 aa17.44■□□□□ 0.38
TRIM35-203ENST00000521253 GGT3PA6NGU5 568 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 XRCC2O43543 280 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 SRP9P49458 86 aaKnown RBP17.43■□□□□ 0.38
TRIM35-203ENST00000521253 KRTAP21-3Q3LHN1 58 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 NXNL2Q5VZ03 156 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 LRRN1Q6UXK5 716 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 FAM57BQ71RH2 274 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 MEPCEQ7L2J0 689 aaKnown RBP17.43■□□□□ 0.38
TRIM35-203ENST00000521253 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.43■□□□□ 0.38
TRIM35-203ENST00000521253 SPSB4Q96A44 273 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 OPA3Q9H6K4 179 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 BRD7Q9NPI1 651 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 NPTNQ9Y639 398 aa17.43■□□□□ 0.38
TRIM35-203ENST00000521253 IGHV3-64DA0A0J9YX35 117 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 ISPDA4D126 451 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 B4DSR2 109 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 EI24O14681 340 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 ALPLP05186 524 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 MMP16P51512 607 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 CHRFAM7AQ494W8 412 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 PEG10Q86TG7 708 aaKnown RBP17.42■□□□□ 0.38
TRIM35-203ENST00000521253 PRIMA1Q86XR5 153 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 SGK3Q96BR1 496 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 SIGLEC11Q96RL6 698 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 CNN2Q99439 309 aaKnown RBP17.42■□□□□ 0.38
TRIM35-203ENST00000521253 ZNF665Q9H7R5 613 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 SP140LQ9H930 580 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 S100A14Q9HCY8 104 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 H2AFY2Q9P0M6 372 aaPredicted RBP17.42■□□□□ 0.38
TRIM35-203ENST00000521253 ZNF319Q9P2F9 582 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 CDC42EP3Q9UKI2 254 aa17.42■□□□□ 0.38
TRIM35-203ENST00000521253 SLC22A31A6NKX4 558 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 CA6P23280 308 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 OR56B2PQ8NGI1 322 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 OR52H1Q8NGJ2 320 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 ZNF420Q8TAQ5 688 aaPredicted RBP17.41■□□□□ 0.38
TRIM35-203ENST00000521253 REEP6Q96HR9 211 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 GAL3ST1Q99999 423 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 SLC22A4Q9H015 551 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 OR10A2Q9H208 303 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 LPAR2Q9HBW0 351 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 USE1Q9NZ43 259 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms