RNA–Protein interactions for RNA: ENST00000514665.1

USP53-209, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,233 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-209ENST00000514665 P2RX3P56373 397 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 SRPXP78539 464 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 OR6K3Q8NGY3 331 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 C14orf79Q96F83 325 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 V9GYH0 126 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 SCN2AQ99250 2005 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 DHHO43323 396 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 TIMM8AO60220 97 aaPredicted RBP11.42□□□□□ -0.58
USP53-209ENST00000514665 MT-CO2P00403 227 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 FCGR2CP31995 323 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 NKX2-1P43699 371 aaPredicted RBP11.42□□□□□ -0.58
USP53-209ENST00000514665 CATR1Q13166 79 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 ZNF266Q14584 549 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 AVPI1Q5T686 147 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 DMBX1Q8NFW5 382 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 OR1N1Q8NGS0 311 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 OR13C8Q8NGS7 320 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 ALKBH3Q96Q83 286 aaPredicted RBP11.42□□□□□ -0.58
USP53-209ENST00000514665 VN1R1Q9GZP7 353 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 LHX6Q9UPM6 363 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 SLCO1B1Q9Y6L6 691 aa11.42□□□□□ -0.58
USP53-209ENST00000514665 LILRA5A6NI73 299 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 HRKO00198 91 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 XRCC2O43543 280 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 MOSPD3O75425 235 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 B4GALT1P15291 398 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 TAS2R30P59541 319 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 EDDM3AQ14507 147 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 MRM1Q6IN84 353 aaKnown RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 GLDNQ6ZMI3 551 aaPredicted RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 OR10Z1Q8NGY1 313 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 OR2G3Q8NGZ4 309 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 OXGR1Q96P68 337 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 MOB1AQ9H8S9 216 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 FLRT3Q9NZU0 649 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 OR6C6A6NF89 314 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 ZFP92A6NM28 416 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 PLA2G10O15496 165 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 WDR1O75083 606 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 NDUFB6O95139 128 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 SFTPA2Q8IWL1 248 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 CDH26Q8IXH8 852 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 EXD3Q8N9H8 876 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 C2CD4CQ8TF44 421 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 FBXW5Q969U6 566 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 ANKRD9Q96BM1 317 aaPredicted RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 MRGPRX4Q96LA9 322 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 OIP5O43482 229 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 CTLA4P16410 223 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 PTGER4P35408 488 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 HBG1P69891 147 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 HBG2P69892 147 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 SHBQ15464 509 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 SLC25A26Q70HW3 274 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 IFI44Q8TCB0 444 aa11.41□□□□□ -0.58
USP53-209ENST00000514665 TRMT61AQ96FX7 289 aaKnown RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 ZNF638Q14966 1978 aaKnown RBP11.41□□□□□ -0.58
USP53-209ENST00000514665 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 MPZL1O95297 269 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 NRASP01111 189 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 SLC25A1P53007 311 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 PSG6Q00889 435 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 MYBPHQ13203 477 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 ETFDHQ16134 617 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 LAIR1Q6GTX8 287 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 FAM199XQ6PEV8 388 aaPredicted RBP11.4□□□□□ -0.58
USP53-209ENST00000514665 AKR7LQ8NHP1 331 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 EMG1Q92979 244 aaKnown RBP11.4□□□□□ -0.58
USP53-209ENST00000514665 ARL5BQ96KC2 179 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 SMCO4Q9NRQ5 59 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 CENPVL1A0A0U1RR11 272 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 OR6C76A6NM76 312 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 SHOXO15266 292 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 IGHEP01854 428 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 HPNP05981 417 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 ADRB1P08588 477 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 FOLR1P15328 257 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 ZNF85Q03923 595 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 TLE4Q04727 773 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 NHLRC1Q6VVB1 395 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 Q6ZRG5 221 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 LYG2Q86SG7 212 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 KCNK15Q9H427 330 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 ROS1P08922 2347 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 MIA3Q5JRA6 1907 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 NME1P15531 152 aaKnown RBP11.4□□□□□ -0.58
USP53-209ENST00000514665 GALP22466 123 aa11.4□□□□□ -0.58
USP53-209ENST00000514665 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms