RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SRRM5B3KS81 715 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 C4orf51C9J302 202 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 MANBAO00462 879 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PLPP1O14494 284 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 COPEO14579 308 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 OR7A17O14581 309 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PHOX2AO14813 284 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 RIPK2O43353 540 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 TPST2O60704 377 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PEX11AO75192 247 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 SPAG7O75391 227 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 EEDO75530 441 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 REM1O75628 298 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 LRATO95237 230 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 ETHE1O95571 254 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 GPR75O95800 540 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 CLUP10909 449 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 KLK2P20151 261 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 BCL3P20749 454 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 IMPDH1P20839 514 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 CNR1P21554 472 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 MAGEA5P43359 124 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 RFX3P48380 749 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 ALDH3B2P48448 385 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 EFNA3P52797 238 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 KCNJ2P63252 427 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 C2orf80Q0P641 193 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 BIKQ13323 160 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 TATDN3Q17R31 274 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 RIPPLY2Q5TAB7 128 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 SLC22A10Q63ZE4 541 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 OPN5Q6U736 354 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 IGFL2Q6UWQ7 119 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 SLC22A9Q8IVM8 553 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PRR22Q8IZ63 422 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 C4orf33Q8N1A6 199 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 LIX1Q8N485 282 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 MORN4Q8NDC4 146 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 KLHL30-AS1Q8NEE0 82 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 NFAM1Q8NET5 270 aaPredicted RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 CNIH3Q8TBE1 160 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 SLC22A8Q8TCC7 542 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 EXOSC8Q96B26 276 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 CHMP6Q96FZ7 201 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 HBEGFQ99075 208 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PAIP2Q9BPZ3 127 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 FAIM2Q9BWQ8 316 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 MS4A8Q9BY19 250 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 AICDAQ9GZX7 198 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 COQ10BQ9H8M1 238 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 LYRM4Q9HD34 91 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 ADAP2Q9NPF8 381 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 MRPL39Q9NYK5 338 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 EHFQ9NZC4 300 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 PSMC3IPQ9P2W1 217 aaPredicted RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 KLHL21Q9UJP4 597 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 TP53TG3Q9ULZ0 132 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 KLF13Q9Y2Y9 288 aaPredicted RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 PPIAL4AQ9Y536 164 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 TPRP12270 2363 aaKnown RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 DNAH14Q0VDD8 3507 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 KMT2BQ9UMN6 2715 aaPredicted RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 IGF2RP11717 2491 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 DCHS1Q96JQ0 3298 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 UQCRHLA0A096LP55 91 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 RNF222A6NCQ9 220 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 GOLGA6L10A6NI86 522 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 A8MT66 165 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 H0YIV9 168 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 FOXE1O00358 373 aaPredicted RBP3.19□□□□□ -1.9
HTT-210ENST00000512909 TP53I11O14683 189 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 TM9SF1O15321 606 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 GMFGO60234 142 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 SLC19A2O60779 497 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 SHBGP04278 402 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 LINC00032P0C843 101 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 COX6B1P14854 86 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 ZNF24P17028 368 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 CSNK2A2P19784 350 aaPredicted RBP3.19□□□□□ -1.9
HTT-210ENST00000512909 SERPINA2P20848 420 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 ATP6V1C1P21283 382 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 HTR2AP28223 471 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 NTSP30990 170 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 MDH2P40926 338 aaKnown RBP3.19□□□□□ -1.9
HTT-210ENST00000512909 DNASE1L1P49184 302 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 POU3F4P49335 361 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 RND3P61587 244 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 HMGCS1Q01581 520 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 FUT7Q11130 342 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 NNATQ16517 81 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 PIGGQ5H8A4 983 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 ZNF678Q5SXM1 525 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 PRAMEF20Q5VT98 475 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 OR5M10Q6IEU7 315 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 H3F3CQ6NXT2 135 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 DGAT2L6Q6ZPD8 337 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 Q6ZR54 194 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 RTL4Q6ZR62 310 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 NCCRP1Q6ZVX7 275 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms