RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MAB21L2Q9Y586 359 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 TENM2Q9NT68 2774 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 TRAV38-1A0A0B4J264 116 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 CXCR6O00574 342 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 OR10H3O60404 316 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 FAM20BO75063 409 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 FBXO24O75426 580 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 OR7A10O76100 309 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 VSIG10L2P0DP72 767 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 CD33P20138 364 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 LAPTM4AQ15012 233 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 SAMD4BQ5PRF9 694 aaKnown RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 INTS11Q5TA45 600 aaKnown RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 SFRP4Q6FHJ7 346 aaPredicted RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 ERICH5Q6P6B1 374 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 LYG1Q8N1E2 194 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 SMYD1Q8NB12 490 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 APOBEC3DQ96AK3 386 aaPredicted RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 CCDC124Q96CT7 223 aaKnown RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 CADM1Q9BY67 442 aaKnown RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 C1orf21Q9H246 121 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 SEMA6AQ9H2E6 1030 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 SMURF1Q9HCE7 757 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 POLE4Q9NR33 117 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 PTTG3PQ9NZH4 202 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 CD300AQ9UGN4 299 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
RNF4-216ENST00000511859 AP3M1Q9Y2T2 418 aa9.48□□□□□ -0.89
RNF4-216ENST00000511859 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 M0QX08 132 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 NPFFO15130 113 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 DNAJC8O75937 253 aaPredicted RBP9.47□□□□□ -0.89
RNF4-216ENST00000511859 ATP5HO75947 161 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 HLA-DPB1P04440 258 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 HSD17B1P14061 328 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 IGLL1P15814 213 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 CD200P41217 278 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 RASSF2P50749 326 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 RAD23AP54725 363 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 RPL27P61353 136 aaKnown RBP9.47□□□□□ -0.89
RNF4-216ENST00000511859 DOC2BQ14184 412 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 OR8B8Q15620 311 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 DNAL1Q4LDG9 190 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 CMTM4Q8IZR5 234 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 PAPD5Q8NDF8 572 aaKnown RBP9.47□□□□□ -0.89
RNF4-216ENST00000511859 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 MOSPD2Q8NHP6 518 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 SLC26A7Q8TE54 656 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 SLC7A6Q92536 515 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 FAM162AQ96A26 154 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 MCUR1Q96AQ8 359 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 TAMM41Q96BW9 452 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 SGTBQ96EQ0 304 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 PRSS27Q9BQR3 290 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 UFSP2Q9NUQ7 469 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
RNF4-216ENST00000511859 MEIOCA2RUB1 952 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 OR6C6A6NF89 314 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 OOEPA6NGQ2 149 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 ERICH4A6NGS2 130 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 H3BUX3 64 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 DVL1O14640 695 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 GSC2O15499 205 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 ZNF682O95780 498 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 SCG5P05408 212 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 FAHP16930 419 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 TNFRSF1BP20333 461 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 CD247P20963 164 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 KDELR2P33947 212 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 RBM34P42696 430 aaKnown RBP9.46□□□□□ -0.9
RNF4-216ENST00000511859 CRYBA2P53672 197 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 ACSM1Q08AH1 577 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 AQP6Q13520 282 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 MPPED2Q15777 294 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 ALG10Q5BKT4 473 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 GLYATQ6IB77 296 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 CYP2R1Q6VVX0 501 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 PATL1Q86TB9 770 aaKnown RBP9.46□□□□□ -0.9
RNF4-216ENST00000511859 PLPP7Q8NBV4 271 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 LY6G5BQ8NDX9 201 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 BHLHE23Q8NDY6 225 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 OR1F12Q8NHA8 337 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 RYR2Q92736 4967 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 TPD52L3Q96J77 140 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 SSX3Q99909 188 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 HCAR1Q9BXC0 346 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 EMC7Q9NPA0 242 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 ATPIF1Q9UII2 106 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 PRPF19Q9UMS4 504 aaKnown RBP9.46□□□□□ -0.9
RNF4-216ENST00000511859 V9GYQ6 96 aa9.46□□□□□ -0.9
RNF4-216ENST00000511859 WI2-2373I1.2A0A1W2PRP0 233 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 A6NIZ1 184 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 E9PQ18 207 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 ARPC2O15144 300 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 GMNNO75496 209 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 SERPINA1P01009 418 aa9.45□□□□□ -0.9
RNF4-216ENST00000511859 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
RNF4-216ENST00000511859 CD28P10747 220 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms