RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CBR4Q8N4T8 237 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 CLDND2Q8NHS1 167 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 SPRYD4Q8WW59 207 aaPredicted RBP11.84□□□□□ -0.51
DDX41-212ENST00000511040 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
DDX41-212ENST00000511040 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 TTTY10Q9BZA0 68 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 ENOPH1Q9UHY7 261 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
DDX41-212ENST00000511040 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 GGT3PA6NGU5 568 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 A8MV72 311 aaPredicted RBP11.83□□□□□ -0.52
DDX41-212ENST00000511040 CLDN25C9JDP6 229 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 F5H5P2 479 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 PSMD9O00233 223 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 MLNRO43193 412 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 BAG2O95816 211 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 ALPLP05186 524 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 SELEP16581 610 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 EFNB1P98172 346 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 AADACL4Q5VUY2 407 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 LRRN1Q6UXK5 716 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 MEPCEQ7L2J0 689 aaKnown RBP11.83□□□□□ -0.52
DDX41-212ENST00000511040 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.83□□□□□ -0.52
DDX41-212ENST00000511040 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 OR13G1Q8NGZ3 307 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 SLC30A2Q9BRI3 323 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 TMEM100Q9NV29 134 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 H2AFY2Q9P0M6 372 aaPredicted RBP11.83□□□□□ -0.52
DDX41-212ENST00000511040 LAMP5Q9UJQ1 280 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 HIVEP2P31629 2446 aa11.83□□□□□ -0.52
DDX41-212ENST00000511040 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 ANKRD65E5RJM6 399 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 ALOX5APP20292 161 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 GFOD2Q3B7J2 385 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 PQLC1Q8N2U9 271 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 UBE2FQ969M7 185 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 SGK3Q96BR1 496 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 PGAM5Q96HS1 289 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 MEGF10Q96KG7 1140 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 CNN2Q99439 309 aaKnown RBP11.82□□□□□ -0.52
DDX41-212ENST00000511040 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
DDX41-212ENST00000511040 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 TOR3AQ9H497 397 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 USE1Q9NZ43 259 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 ZNF319Q9P2F9 582 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 ORC6Q9Y5N6 252 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 DYSFO75923 2080 aa11.82□□□□□ -0.52
DDX41-212ENST00000511040 ISPDA4D126 451 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 APOL3O95236 402 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 TGFAP01135 160 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 CA6P23280 308 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 ALDH3A2P51648 485 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 NXNL2Q5VZ03 156 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 PRSS45Q7RTY3 260 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 KRT77Q7Z794 578 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 FAM81AQ8TBF8 368 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 HPS1Q92902 700 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 RAB1CQ92928 201 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 DVL3Q92997 716 aaPredicted RBP11.81□□□□□ -0.52
DDX41-212ENST00000511040 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 REEP6Q96HR9 211 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 SLC29A1Q99808 456 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 LPAR2Q9HBW0 351 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 ADGRL4Q9HBW9 690 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 IL19Q9UHD0 177 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
DDX41-212ENST00000511040 TANC2Q9HCD6 1990 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 NF1P21359 2839 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
DDX41-212ENST00000511040 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
DDX41-212ENST00000511040 MALRD1Q5VYJ5 2156 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SLC22A31A6NKX4 558 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 MAGEB4O15481 346 aaPredicted RBP11.8□□□□□ -0.52
DDX41-212ENST00000511040 XRCC2O43543 280 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 APOC1P02654 83 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SBK2P0C263 348 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 TNFRSF1AP19438 455 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SRP9P49458 86 aaKnown RBP11.8□□□□□ -0.52
DDX41-212ENST00000511040 MMP16P51512 607 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 LMO4P61968 165 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 OR8G1Q15617 311 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 FAM166AQ6J272 317 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 MOGAT3Q86VF5 341 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 GID4Q8IVV7 300 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SLC35F2Q8IXU6 374 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms