RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 FBN3Q75N90 2809 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 CEACAM18A8MTB9 384 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 H3BN98 237 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 RGS9O75916 674 aaPredicted RBP19.28■□□□□ 0.68
SNF8-209ENST00000510558 ZNF205O95201 554 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 GRK5P34947 590 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 PRKXP51817 358 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 BLVRAP53004 296 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 ZNF92Q03936 586 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 TAF13Q15543 124 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 LINC01590Q5TEZ4 76 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 TMEM179BQ7Z7N9 219 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 OR2AE1Q8NHA4 323 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 KCNJ15Q99712 375 aa19.28■□□□□ 0.68
SNF8-209ENST00000510558 C5orf63A6NC05 138 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 FAM183AA6NL82 134 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 LRRC30A6NM36 301 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 CD300LBA8K4G0 201 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 A8MXK9 166 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 ZNF878C9JN71 531 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 GNGT2O14610 69 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 PMELP40967 661 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 GATA4P43694 442 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 MAB21L1Q13394 359 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 DNAL1Q4LDG9 190 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 ESCO2Q56NI9 601 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 GLYATL3Q5SZD4 288 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 C1orf87Q8N0U7 546 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 CELF2-AS1Q8N7Q2 184 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 BCAS4Q8TDM0 211 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 MED20Q9H944 212 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 TMEM165Q9HC07 324 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 FAM53CQ9NYF3 392 aa19.27■□□□□ 0.68
SNF8-209ENST00000510558 PDP1Q9P0J1 537 aaPredicted RBP19.27■□□□□ 0.68
SNF8-209ENST00000510558 TRAPPC2LH3BP13 241 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 GYG2O15488 501 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 FSHBP01225 129 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 WNT2P09544 360 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 SLC2A1P11166 492 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 HOXB6P17509 224 aaKnown RBP19.26■□□□□ 0.67
SNF8-209ENST00000510558 CA6P23280 308 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 CD200P41217 278 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 OR8G1Q15617 311 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 FAM201AQ5SY85 155 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 SPATC1Q76KD6 591 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.26■□□□□ 0.67
SNF8-209ENST00000510558 DEFB108BQ8NET1 73 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 OTULINQ96BN8 352 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 SLC22A4Q9H015 551 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 LRCH1Q9Y2L9 728 aa19.26■□□□□ 0.67
SNF8-209ENST00000510558 NOP16Q9Y3C1 178 aaKnown RBP19.26■□□□□ 0.67
SNF8-209ENST00000510558 GGT3PA6NGU5 568 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 RPS2P15880 293 aaKnown RBP19.25■□□□□ 0.67
SNF8-209ENST00000510558 ZNF12P17014 697 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 RAD23AP54725 363 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 EIF2B1Q14232 305 aaKnown RBP19.25■□□□□ 0.67
SNF8-209ENST00000510558 FLOT2Q14254 428 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 PRAMEF6Q5VXH4 476 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 USP43Q70EL4 1123 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 SPATA24Q86W54 205 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 ERI1Q8IV48 349 aaKnown RBP19.25■□□□□ 0.67
SNF8-209ENST00000510558 OR6N2Q8NGY6 317 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 ZFAND2BQ8WV99 257 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 ERGIC1Q969X5 290 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 INTS14Q96SY0 518 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 N6AMT1Q9Y5N5 214 aa19.25■□□□□ 0.67
SNF8-209ENST00000510558 E2F6O75461 281 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 FSTL3O95633 263 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 IRF2P14316 349 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 CPT2P23786 658 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 POU1F1P28069 291 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 HILS1P60008 231 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 GRB2P62993 217 aaKnown RBP19.24■□□□□ 0.67
SNF8-209ENST00000510558 ZNF154Q13106 437 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 ZNF404Q494X3 552 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 DPY19L4Q7Z388 723 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 KLBQ86Z14 1044 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 OR11L1Q8NGX0 322 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 Q8TCH9 128 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 SLC7A6OSQ96CW6 309 aaPredicted RBP19.24■□□□□ 0.67
SNF8-209ENST00000510558 SLC6A7Q99884 636 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 TMEM246Q9BRR3 403 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 ADAT1Q9BUB4 502 aaKnown RBP19.24■□□□□ 0.67
SNF8-209ENST00000510558 SSBP3Q9BWW4 388 aaPredicted RBP19.24■□□□□ 0.67
SNF8-209ENST00000510558 OPA3Q9H6K4 179 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 UFSP2Q9NUQ7 469 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 MIOXQ9UGB7 285 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 OR5V1Q9UGF6 321 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 PPIAL4AQ9Y536 164 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 INSIG2Q9Y5U4 225 aa19.24■□□□□ 0.67
SNF8-209ENST00000510558 XRCC2O43543 280 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 FAM20BO75063 409 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 GLCEO94923 617 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 PAICSP22234 425 aaKnown RBP19.23■□□□□ 0.67
SNF8-209ENST00000510558 GSTT1P30711 240 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 SLC15A1P46059 708 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 GINS1Q14691 196 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 MPPED2Q15777 294 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 HS3ST5Q8IZT8 346 aa19.23■□□□□ 0.67
SNF8-209ENST00000510558 NEIL1Q96FI4 390 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms