RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KLHL22Q53GT1 634 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 LRRN1Q6UXK5 716 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 PLEKHG7Q6ZR37 379 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 BCDIN3DQ7Z5W3 292 aaKnown RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 LRP11Q86VZ4 500 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 OR10H4Q8NGA5 316 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 OR13G1Q8NGZ3 307 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 FAM168AQ92567 244 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 CMBLQ96DG6 245 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 RNFT2Q96EX2 444 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 PGAM5Q96HS1 289 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 SORCS2Q96PQ0 1159 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 OR8B4Q96RC9 309 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 RHNO1Q9BSD3 238 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 SAP30LQ9HAJ7 183 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 ABCB9Q9NP78 766 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 INPP5EQ9NRR6 644 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 PTTG3PQ9NZH4 202 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 LRP12Q9Y561 859 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 CELSR1Q9NYQ6 3014 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 TMEM269A0A1B0GVZ9 245 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 A0A1W2PQL4 384 aaPredicted RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 DAPL1A0PJW8 107 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 GGT3PA6NGU5 568 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 IQCF6A8MYZ5 107 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 IFNL4K9M1U5 179 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 DLGAP1O14490 977 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 TBX1O43435 398 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 SSX4O60224 188 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 ATP6V1G2O95670 118 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 DBTP11182 482 aaKnown RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 NAT2P11245 290 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 PSKH1P11801 424 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 DAOP14920 347 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 SLC25A16P16260 332 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 GABRB1P18505 474 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 TNFRSF1AP19438 455 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 MMP15P51511 669 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 MMP16P51512 607 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 CSNK2BP67870 215 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 ADARB1P78563 741 aaKnown RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 ZNF91Q05481 1191 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 SLC3A1Q07837 685 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 MRPL28Q13084 256 aaKnown RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 GK2Q14410 553 aaPredicted RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 MAD2L1BPQ15013 274 aaPredicted RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 USP51Q70EK9 711 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 KLBQ86Z14 1044 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 TGIF2LYQ8IUE0 185 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 ACBD7Q8N6N7 88 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 CSNK2A3Q8NEV1 391 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 OR8G5Q8NG78 346 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 ELMOD3Q96FG2 381 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 REEP6Q96HR9 211 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 Q96MF0 132 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 PIMREGQ9BSJ6 248 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 DLL4Q9NR61 685 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 TMEM100Q9NV29 134 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 MRPL15Q9P015 296 aaKnown RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 MYEF2Q9P2K5 600 aaKnown RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 NKX1-2Q9UD57 310 aaPredicted RBP7.81□□□□□ -1.16
NUP54-207ENST00000508583 N6AMT1Q9Y5N5 214 aa7.81□□□□□ -1.16
NUP54-207ENST00000508583 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 A0A0U1RQV5 110 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 METTL15A6NJ78 407 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 ANKRD30BLA7E2S9 258 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 LOC110117498-PIK3R3F6TDL0 507 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 SPRY3O43610 288 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 MTRF1O75570 445 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 CD55P08174 381 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 ATP6V1B1P15313 513 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 FOSL1P15407 271 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 MYL12AP19105 171 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 ACHEP22303 614 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 SRP9P49458 86 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 HLXQ14774 488 aaPredicted RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 SNAI3Q3KNW1 292 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 GLYATL3Q5SZD4 288 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 BCL2L15Q5TBC7 163 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 FAM57BQ71RH2 274 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 COMMD2Q86X83 199 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 ZNF786Q8N393 782 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 YIPF7Q8N8F6 280 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 SPERTQ8NA61 448 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 CCDC54Q8NEL0 328 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 OR2Z1Q8NG97 314 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 RDH5Q92781 318 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 UBE2FQ969M7 185 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 SPSB4Q96A44 273 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 AMELYQ99218 206 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 REPIN1Q9BWE0 567 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 TPK1Q9H3S4 243 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 CHODLQ9H9P2 273 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 MRPS18AQ9NVS2 196 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 FAM206AQ9NX38 181 aa7.8□□□□□ -1.16
NUP54-207ENST00000508583 CHCHD3Q9NX63 227 aaKnown RBP7.8□□□□□ -1.16
NUP54-207ENST00000508583 IL19Q9UHD0 177 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms