RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SLC17A2O00624 439 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR1I1O60431 355 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CDC14BO60729 498 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PNPP00491 289 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GASTP01350 101 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 IL2RAP01589 272 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 NDUFB7P17568 137 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MMP11P24347 488 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LMO2P25791 158 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 BSGP35613 385 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PPICP45877 212 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SELENOPP49908 381 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF84P51523 738 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 HSD17B7P56937 341 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RPS13P62277 151 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TAF13Q15543 124 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CSRP2Q16527 193 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DOK7Q18PE1 504 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PCGF3Q3KNV8 242 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FAM162BQ5T6X4 162 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ANKRD34AQ69YU3 496 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 HEPN1Q6WQI6 88 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 Q6ZPB1 254 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CPOQ8IVL8 374 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PIANPQ8IYJ0 282 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF383Q8NA42 475 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF738Q8NE65 137 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR10H4Q8NGA5 316 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR4K14Q8NGD5 310 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LGALS14Q8TCE9 139 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF296Q8WUU4 475 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PACRGQ96M98 296 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CLCC1Q96S66 551 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SOX7Q9BT81 388 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SORBS1Q9BX66 1292 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR51I1Q9H343 314 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MOB1AQ9H8S9 216 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FKRPQ9H9S5 495 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF281Q9Y2X9 895 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 NCOR2Q9Y618 2525 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 C17orf102A2RUQ5 167 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 EMC8O43402 210 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 HLA-AP01891 365 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PPBPP02775 128 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DCNP07585 359 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FCGR3AP08637 254 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 THEGLP0DJG4 465 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SRMP19623 302 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 NT5EP21589 574 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CCNOP22674 350 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SHC1P29353 583 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR3A1P47881 315 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PTH2RP49190 550 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DHPSP49366 369 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RND2P52198 227 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FAM3BP58499 235 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2KP61086 200 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RAB11AP62491 216 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 POLR2LP62875 67 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TNFRSF9Q07011 255 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DHRS2Q13268 280 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM183BQ1AE95 376 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM128Q5BJH2 165 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DCAF10Q5QP82 559 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GGNBP1Q5YKI7 109 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR2T2Q6IF00 324 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TNFAIP8L2Q6P589 184 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 KCTD18Q6PI47 426 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 Q6ZTK2 550 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SYT13Q7L8C5 426 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 C6orf120Q7Z4R8 191 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MDGA2Q7Z553 956 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PIM3Q86V86 326 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SCN4BQ8IWT1 228 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM183AQ8IXX5 376 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 JAGN1Q8N5M9 183 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 BPIFA2Q96DR5 249 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FAM46AQ96IP4 442 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FAM71F1Q96KD3 344 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SLC35G5Q96KT7 338 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LRFN3Q9BTN0 628 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ASB8Q9H765 288 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZDHHC3Q9NYG2 299 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 FBXW2Q9UKT8 454 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 VWFP04275 2813 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CHD3Q12873 2000 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 A0A087WUU8 490 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 C5orf51A6NDU8 294 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 F6UZH7 168 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CCSO14618 274 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PRH1P02810 166 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MT-ND4P03905 459 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 WNT1P04628 370 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 AMY2AP04746 511 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 HSPB1P04792 205 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 NFYBP25208 207 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SOAT1P35610 550 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GPR4P46093 362 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 POLR2HP52434 150 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 STXBP1P61764 594 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms