RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 IGHV1-69-2A0A0G2JMI3 117 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 XRCC2O43543 280 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 ANXA2P07355 339 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 SBK2P0C263 348 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 TNFSF4P23510 183 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 SNRPGP62308 76 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 TNFAIP6P98066 277 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 ROM1Q03395 351 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 KRTAP1-1Q07627 177 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 POU4F2Q12837 409 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 SLC35F2Q8IXU6 374 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 OR2Z1Q8NG97 314 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 OR52H1Q8NGJ2 320 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 OR13G1Q8NGZ3 307 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 OR2AE1Q8NHA4 323 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 RFKQ969G6 155 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 UBE2FQ969M7 185 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 RDH12Q96NR8 316 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 OR8B4Q96RC9 309 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 ZNF275Q9NSD4 429 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 CLN6Q9NWW5 311 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 DNAJC27Q9NZQ0 273 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 LRP12Q9Y561 859 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 GMPPBQ9Y5P6 360 aa15.47■□□□□ 0.07
PDLIM7-209ENST00000503346 CD300LBA8K4G0 201 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 PRR32B1ATL7 298 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 PHYHO14832 338 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 CDC14BO60729 498 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 LILRA1O75019 489 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 ZNF254O75437 659 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 TACSTD2P09758 323 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 PRSS12P56730 875 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 PSMA6P60900 246 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 TMEM249Q2WGJ8 235 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 FAM57BQ71RH2 274 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 KRT77Q7Z794 578 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 BHLHE23Q8NDY6 225 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 OR51G2Q8NGK0 314 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 MROQ9BYG7 248 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 C8orf4Q9NR00 106 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 TMEM100Q9NV29 134 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 IL19Q9UHD0 177 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 N6AMT1Q9Y5N5 214 aa15.46■□□□□ 0.07
PDLIM7-209ENST00000503346 DLGAP1O14490 977 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 SLC16A6O15403 523 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 TBX1O43435 398 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 DCTDP32321 178 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 GPR6P46095 362 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 TRIP10Q15642 601 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 OCLNQ16625 522 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 HFEQ30201 348 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 SPRNQ5BIV9 151 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 MEDAGQ5VYS4 303 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF679Q8IYX0 411 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 RFLNBQ8N5W9 214 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 SPRYD4Q8WW59 207 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 SGK3Q96BR1 496 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 PGAM5Q96HS1 289 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 OR10A2Q9H208 303 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 RGCCQ9H4X1 137 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 FAM118AQ9NWS6 357 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 SMPD3Q9NY59 655 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF319Q9P2F9 582 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 CACNG2Q9Y698 323 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 MTORP42345 2549 aa15.45■□□□□ 0.06
PDLIM7-209ENST00000503346 LOC100130705A0A1B0GUX0 176 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 GGT3PA6NGU5 568 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 ACOD1A6NK06 481 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF670-ZNF695F2Z2N8 137 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 MLNRO43193 412 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 ENTPD6O75354 484 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 OR2T7P0C7T2 308 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 GABRB1P18505 474 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 TNFRSF1AP19438 455 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 CFL1P23528 166 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 EGR3Q06889 387 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 TIGD6Q17RP2 521 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 ZNF322Q6U7Q0 402 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 PACRGLQ8N7B6 248 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 OR2T27Q8NH04 317 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 REEP6Q96HR9 211 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 OR2V2Q96R30 315 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 SLC22A4Q9H015 551 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 BRD7Q9NPI1 651 aa15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 MRPL15Q9P015 296 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-209ENST00000503346 hCG_38984A0A1B0GV85 526 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 H0YL77 283 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 PSMD9O00233 223 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 CASQ2O14958 399 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 PPIHO43447 177 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 MPZL2O60487 215 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 PEX2P28328 305 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 DDOSTP39656 456 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 CHN2P52757 468 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 RIDAP52758 137 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 CXCR4P61073 352 aa15.43■□□□□ 0.06
PDLIM7-209ENST00000503346 ELF3P78545 371 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms