RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TTTY10Q9BZA0 68 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 OPA3Q9H6K4 179 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 MRPS18AQ9NVS2 196 aaKnown RBP21.4■■□□□ 1.02
LSM6-202ENST00000502781 MRM2Q9UI43 246 aaKnown RBP21.4■■□□□ 1.02
LSM6-202ENST00000502781 PLSCR5A0PG75 271 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 ANXA2P07355 339 aaKnown RBP21.39■■□□□ 1.02
LSM6-202ENST00000502781 GNAO1P09471 354 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 PCGF3Q3KNV8 242 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 Q6ZR03 302 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 FAM57BQ71RH2 274 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 PGAP1Q75T13 922 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 OR10H4Q8NGA5 316 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 LGALS12Q96DT0 336 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 Q96MF0 132 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 TBX5Q99593 518 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 AMBNQ9NP70 447 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 FAM206AQ9NX38 181 aa21.39■■□□□ 1.02
LSM6-202ENST00000502781 A0A1B0GWJ7 208 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 ACOD1A6NK06 481 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 SRSF10O75494 262 aaKnown RBP21.38■■□□□ 1.01
LSM6-202ENST00000502781 NCR1O76036 304 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 IGHV1-46P01743 117 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 SELEP16581 610 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 MMP16P51512 607 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 RIDAP52758 137 aaKnown RBP21.38■■□□□ 1.01
LSM6-202ENST00000502781 AQP4P55087 323 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 ZNF85Q03923 595 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 CDK5R2Q13319 367 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 ZMAT1Q5H9K5 638 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 ZNF525Q8N782 197 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 OR8G5Q8NG78 346 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 FBLIM1Q8WUP2 373 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 SGK3Q96BR1 496 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 MSL2Q9HCI7 577 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 MYOZ1Q9NP98 299 aaPredicted RBP21.38■■□□□ 1.01
LSM6-202ENST00000502781 IKZF2Q9UKS7 526 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 ZDHHC8Q9ULC8 765 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 RRP15Q9Y3B9 282 aaKnown RBP21.38■■□□□ 1.01
LSM6-202ENST00000502781 F8P00451 2351 aa21.38■■□□□ 1.01
LSM6-202ENST00000502781 MAGEB4O15481 346 aaPredicted RBP21.37■■□□□ 1.01
LSM6-202ENST00000502781 HPXP02790 462 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 MAGEB1P43366 347 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 PRSS12P56730 875 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 ACTC1P68032 377 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 ACTA1P68133 377 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 SMN1Q16637 294 aaKnown RBP21.37■■□□□ 1.01
LSM6-202ENST00000502781 FAM209AQ5JX71 171 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 MRPL21Q7Z2W9 205 aaKnown RBP21.37■■□□□ 1.01
LSM6-202ENST00000502781 CNIH3Q8TBE1 160 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 DIRC2Q96SL1 478 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 OR10A2Q9H208 303 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 VCX3BQ9H321 246 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 RGCCQ9H4X1 137 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 BRD7Q9NPI1 651 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 RPL36Q9Y3U8 105 aaKnown RBP21.37■■□□□ 1.01
LSM6-202ENST00000502781 PCDHGB1Q9Y5G3 927 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 N6AMT1Q9Y5N5 214 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 HIVEP1P15822 2718 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 VPS13CQ709C8 3753 aa21.37■■□□□ 1.01
LSM6-202ENST00000502781 TMEM269A0A1B0GVZ9 245 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 TBX1O43435 398 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 LILRA1O75019 489 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 SULT1C4O75897 302 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 DSCR9P59020 149 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 RAB40BQ12829 278 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 C8orf59Q8N0T1 100 aaPredicted RBP21.36■■□□□ 1.01
LSM6-202ENST00000502781 PGAM5Q96HS1 289 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 SLC30A2Q9BRI3 323 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 CD300LBA8K4G0 201 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 IGHA1P01876 353 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 CD55P08174 381 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 CSF3P09919 207 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 DAOP14920 347 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 CCL8P80075 99 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 MRPS11P82912 194 aaKnown RBP21.36■■□□□ 1.01
LSM6-202ENST00000502781 ZNF829Q3KNS6 432 aaPredicted RBP21.36■■□□□ 1.01
LSM6-202ENST00000502781 OR5AS1Q8N127 324 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 ZNF786Q8N393 782 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 ACBD7Q8N6N7 88 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 OR8B12Q8NGG6 310 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 NUFIP1Q9UHK0 495 aaKnown RBP21.36■■□□□ 1.01
LSM6-202ENST00000502781 MYRFQ9Y2G1 1151 aa21.36■■□□□ 1.01
LSM6-202ENST00000502781 ACANP16112 2415 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 FLNAP21333 2647 aaKnown RBP21.35■■□□□ 1.01
LSM6-202ENST00000502781 hCG_38984A0A1B0GV85 526 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 METTL15A6NJ78 407 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 SPRY3O43610 288 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 RRP9O43818 475 aaKnown RBP21.35■■□□□ 1.01
LSM6-202ENST00000502781 PNPP00491 289 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 KRT8P05787 483 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 CFL1P23528 166 aaKnown RBP21.35■■□□□ 1.01
LSM6-202ENST00000502781 FAM3AP98173 230 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 TNK1Q13470 666 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 TIGD6Q17RP2 521 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 LAIR2Q6ISS4 152 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 CLEC2AQ6UVW9 174 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 C10orf105Q8TEF2 133 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 UBASH3BQ8TF42 649 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 REEP6Q96HR9 211 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 ZNF649Q9BS31 505 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms