RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CXCL12P48061 93 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 RFX3P48380 749 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 KRT6CP48668 564 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 HCCSP53701 268 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LIM2P55344 173 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ERVK-8P63133 956 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 RPS21P63220 83 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 UBE2IP63279 158 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 VLDLRP98155 873 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 REEP5Q00765 189 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 SRYQ05066 204 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ELP6Q0PNE2 266 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ART3Q13508 389 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 GANABQ14697 944 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 DUSP7Q16829 419 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 IMPG1Q17R60 797 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZSWIM7Q19AV6 140 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 EOGTQ5NDL2 527 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 C1orf146Q5VVC0 180 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LEG1Q6P5S2 330 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 TMEM107Q6UX40 140 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 NPSR1Q6W5P4 371 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 WDR88Q6ZMY6 472 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LRRC74BQ6ZQY2 392 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 MOB1BQ7L9L4 216 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 C6orf120Q7Z4R8 191 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 DHDDSQ86SQ9 333 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ADAMTSL2Q86TH1 951 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 PARGQ86W56 976 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 C9orf40Q8IXQ3 194 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 MICU2Q8IYU8 434 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CEND1Q8N111 149 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LINC00471Q8N535 108 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ACOT4Q8N9L9 421 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 MFSD9Q8NBP5 474 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR4A15Q8NGL6 344 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR9A2Q8NGT5 310 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR2T34Q8NGX1 318 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR2L8Q8NGY9 312 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR5K2Q8NHB8 316 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 WDR36Q8NI36 951 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 MCOLN3Q8TDD5 553 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZFP90Q8TF47 636 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LCN9Q8WX39 176 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CDS1Q92903 461 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CLDN23Q96B33 292 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 TMEM159Q96B96 161 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 TAMM41Q96BW9 452 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 C8orf44Q96CB5 159 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 TM4SF19Q96DZ7 209 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CMTM7Q96FZ5 175 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 FCRL1Q96LA6 429 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZNF681Q96N22 645 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 LINC00167Q96N53 147 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZNF578Q96N58 590 aaPredicted RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR2A5Q96R48 311 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CGREF1Q99674 301 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZSCAN5AQ9BUG6 496 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 NUDT9Q9BW91 350 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 TM2D1Q9BX74 207 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 DPY30Q9C005 99 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 SIRPDQ9H106 197 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 STMN4Q9H169 189 aaPredicted RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 OR51I1Q9H343 314 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 DSN1Q9H410 356 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 CLMPQ9H6B4 373 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 RNF167Q9H6Y7 350 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 POPDC3Q9HBV1 291 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 MRPS30Q9NP92 439 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 MEPEQ9NQ76 525 aaPredicted RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 SMOXQ9NWM0 555 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 HRASLS2Q9NWW9 162 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 C1orf109Q9NX04 203 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ANKMY1Q9P2S6 941 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 SPASTQ9UBP0 616 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 KCNN3Q9UGI6 736 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 IL20RAQ9UHF4 553 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 BCAP29Q9UHQ4 241 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 ZNF223Q9UK11 482 aaPredicted RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 AURKCQ9UQB9 309 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 NDUFAF1Q9Y375 327 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 STRAPQ9Y3F4 350 aaKnown RBP1.97□□□□□ -2.09
RIF1-212ENST00000498041 CLCA3PQ9Y6N3 262 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 SDK2Q58EX2 2172 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 DOCK10Q96BY6 2186 aa1.97□□□□□ -2.09
RIF1-212ENST00000498041 COL5A1P20908 1838 aaPredicted RBP1.96□□□□□ -2.1
RIF1-212ENST00000498041 A0A0G2JMM0 328 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 A0A1W2PPB8 328 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 A0A1W2PRS3 328 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 TCRBV3S1A0A5B6 114 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PINLYPA6NC86 204 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 KIR3DP1A8MWS1 328 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PRAMEF26H0Y7S4 382 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 H0YHG0 523 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 H0YIV9 168 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 H3BSA7 217 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 H3BSH0 61 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 K7EM74 188 aa1.96□□□□□ -2.1
RIF1-212ENST00000498041 PSMD11O00231 422 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms