RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ACTR3BQ9P1U1 418 aa13.55□□□□□ -0.24
VIM-208ENST00000497849 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
VIM-208ENST00000497849 BAG5Q9UL15 447 aa13.55□□□□□ -0.24
VIM-208ENST00000497849 FAM96BQ9Y3D0 163 aa13.55□□□□□ -0.24
VIM-208ENST00000497849 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 OR7A10O76100 309 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 MPIG6BO95866 241 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 MT-ND1P03886 318 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 TRAP1Q12931 704 aaKnown RBP13.54□□□□□ -0.24
VIM-208ENST00000497849 MAB21L1Q13394 359 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 KPNB1Q14974 876 aaKnown RBP13.54□□□□□ -0.24
VIM-208ENST00000497849 CLEC12AQ5QGZ9 265 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 FOXB2Q5VYV0 432 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 FBXW12Q6X9E4 464 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 Q8TCH9 128 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 ASB9Q96DX5 294 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 ZNF582Q96NG8 517 aaPredicted RBP13.54□□□□□ -0.24
VIM-208ENST00000497849 RBP7Q96R05 134 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 MUC13Q9H3R2 512 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 POLE4Q9NR33 117 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 PTTG3PQ9NZH4 202 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 RPS6KA6Q9UK32 745 aa13.54□□□□□ -0.24
VIM-208ENST00000497849 A0A1B0GWJ7 208 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 RNASEK-C17orf49H0YIS7 233 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 K7EIL1 84 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 HLA-DPB1P04440 258 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 FBP1P09467 338 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 IRF2P14316 349 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
VIM-208ENST00000497849 FLOT2Q14254 428 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 IFI44LQ53G44 452 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 C1orf122Q6ZSJ8 110 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 TSEN54Q7Z6J9 526 aaKnown RBP13.53□□□□□ -0.24
VIM-208ENST00000497849 LYG1Q8N1E2 194 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 PPP1R35Q8TAP8 253 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 LIPHQ8WWY8 451 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 LZICQ8WZA0 190 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 PYURFQ96I23 114 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 WWC2-AS2Q96NR7 200 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 PPA2Q9H2U2 334 aa13.53□□□□□ -0.24
VIM-208ENST00000497849 J3KTA2 159 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 SGCEO43556 437 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 FAM20BO75063 409 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 DIRAS1O95057 198 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 GUCA1AP43080 201 aaPredicted RBP13.52□□□□□ -0.25
VIM-208ENST00000497849 RAD23AP54725 363 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 ACTR3P61158 418 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
VIM-208ENST00000497849 VMO1Q7Z5L0 202 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 IGFN1Q86VF2 1251 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 NKAIN4Q8IVV8 208 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 KLHDC1Q8N7A1 406 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 SGTBQ96EQ0 304 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 LRGUKQ96M69 825 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 WACQ9BTA9 647 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 RHCGQ9UBD6 479 aa13.52□□□□□ -0.25
VIM-208ENST00000497849 SAMD4AQ9UPU9 718 aaKnown RBP13.52□□□□□ -0.25
VIM-208ENST00000497849 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
VIM-208ENST00000497849 IQCF6A8MYZ5 107 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 ADAM20O43506 726 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 OR10H3O60404 316 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 DBHP09172 617 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
VIM-208ENST00000497849 PIN1Q13526 163 aaPredicted RBP13.51□□□□□ -0.25
VIM-208ENST00000497849 MPPED2Q15777 294 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 ALG10Q5BKT4 473 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 PRAMEF6Q5VXH4 476 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 BTN2A1Q7KYR7 527 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 SPATA24Q86W54 205 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 C10orf67Q8IYJ2 551 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 ERGIC1Q969X5 290 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 RASD2Q96D21 266 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 MMP28Q9H239 520 aa13.51□□□□□ -0.25
VIM-208ENST00000497849 OR6C6A6NF89 314 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 J3QW42 95 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 IGF2P01344 180 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 FPR3P25089 353 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 KIR2DS4P43632 304 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 PRB3Q04118 309 aaPredicted RBP13.5□□□□□ -0.25
VIM-208ENST00000497849 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 C11orf88Q6PI97 169 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 CELF2-AS1Q8N7Q2 184 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 OR11L1Q8NGX0 322 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 OR5R1Q8NH85 324 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 NPRL2Q8WTW4 380 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 STMN2Q93045 179 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 C7orf34Q96L11 122 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 UFSP2Q9NUQ7 469 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 TMEM100Q9NV29 134 aa13.5□□□□□ -0.25
VIM-208ENST00000497849 RIMS3Q9UJD0 308 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms