RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CDK1P06493 297 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 OR4A8P0C604 315 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 EEF1B2P24534 225 aaKnown RBP17.22■□□□□ 0.35
CTSD-206ENST00000497544 GCH1P30793 250 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 OR12D2P58182 307 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 SELENOVP59797 346 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 PSMA6P60900 246 aaKnown RBP17.22■□□□□ 0.35
CTSD-206ENST00000497544 ERVS71-1P61550 626 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 MVKQ03426 396 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 MALLQ13021 153 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 SPATA46Q5T0L3 261 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 EGFL6Q8IUX8 553 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 ZNF611Q8N823 705 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 OR52H1Q8NGJ2 320 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 TMEM171Q8WVE6 324 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 C4orf36Q96KX1 117 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 YTHDF1Q9BYJ9 559 aaKnown RBP17.22■□□□□ 0.35
CTSD-206ENST00000497544 OR2J1Q9GZK6 312 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 FAIMQ9NVQ4 179 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 PTTG3PQ9NZH4 202 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
CTSD-206ENST00000497544 ACOD1A6NK06 481 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 LIMS3P0CW19 117 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 LIMS4P0CW20 117 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 C21orf33P30042 268 aaPredicted RBP17.21■□□□□ 0.35
CTSD-206ENST00000497544 TTKP33981 857 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 SERPINF1P36955 418 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 ETV1P50549 477 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 SLC35A2P78381 396 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 ADIPOQQ15848 244 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 SNAI3Q3KNW1 292 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 SYS1Q8N2H4 156 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 MUC15Q8N387 334 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 KLHL36Q8N4N3 616 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 SYNPRQ8TBG9 265 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 MARS2Q96GW9 593 aaKnown RBP17.21■□□□□ 0.35
CTSD-206ENST00000497544 FOXC2Q99958 501 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 OR10A2Q9H208 303 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 DUSP21Q9H596 190 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 DUSP13Q9UII6 198 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 FZR1Q9UM11 496 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 CAB39Q9Y376 341 aaPredicted RBP17.21■□□□□ 0.35
CTSD-206ENST00000497544 R4GMQ9 66 aa17.21■□□□□ 0.35
CTSD-206ENST00000497544 LOC110117498-PIK3R3F6TDL0 507 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 ADRA2AP08913 450 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 FOSL1P15407 271 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 MMP16P51512 607 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 AGAP6Q5VW22 663 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 KLF14Q8TD94 323 aaPredicted RBP17.2■□□□□ 0.34
CTSD-206ENST00000497544 MRPL24Q96A35 216 aaKnown RBP17.2■□□□□ 0.34
CTSD-206ENST00000497544 CMBLQ96DG6 245 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 SIGLEC11Q96RL6 698 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 PLK3Q9H4B4 646 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 FAM206AQ9NX38 181 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 ERVK-18Q9QC07 812 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 CLEC2DQ9UHP7 191 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 ERGIC3Q9Y282 383 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 SNX5Q9Y5X3 404 aa17.2■□□□□ 0.34
CTSD-206ENST00000497544 XRCC2O43543 280 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 RGS10O43665 173 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 PNPP00491 289 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 MT-ND5P03915 603 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 ZNF250P15622 560 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 PSMB10P40306 273 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 GBX2P52951 348 aaPredicted RBP17.19■□□□□ 0.34
CTSD-206ENST00000497544 TIGD6Q17RP2 521 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 C20orf204Q6ZNR8 217 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 PRSS45Q7RTY3 260 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 SPRYD4Q8WW59 207 aaPredicted RBP17.19■□□□□ 0.34
CTSD-206ENST00000497544 NRGNQ92686 78 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 SYT3Q9BQG1 590 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 CCDC90BQ9GZT6 254 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 PBOV1Q9GZY1 135 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 POFUT1Q9H488 388 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 ISG20L2Q9H9L3 353 aaKnown RBP17.19■□□□□ 0.34
CTSD-206ENST00000497544 ACOXLQ9NUZ1 547 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 PAK1IP1Q9NWT1 392 aaPredicted RBP17.19■□□□□ 0.34
CTSD-206ENST00000497544 EDARQ9UNE0 448 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 AKAP6Q13023 2319 aa17.19■□□□□ 0.34
CTSD-206ENST00000497544 B9A039 149 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 H3BSA7 217 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 HTR1AP08908 422 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 KLF3P57682 345 aaPredicted RBP17.18■□□□□ 0.34
CTSD-206ENST00000497544 MOGQ16653 247 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 MSMPQ1L6U9 139 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 GLYATL3Q5SZD4 288 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 OR2G6Q5TZ20 316 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 MBNL2Q5VZF2 373 aaKnown RBP17.18■□□□□ 0.34
CTSD-206ENST00000497544 MRPL21Q7Z2W9 205 aaKnown RBP17.18■□□□□ 0.34
CTSD-206ENST00000497544 OR8B12Q8NGG6 310 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 SGCDQ92629 289 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 RORBQ92753 470 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 SGK3Q96BR1 496 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 HAVCR1Q96D42 359 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 PELI1Q96FA3 418 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 MRPL37Q9BZE1 423 aaKnown RBP17.18■□□□□ 0.34
CTSD-206ENST00000497544 MOB1AQ9H8S9 216 aa17.18■□□□□ 0.34
CTSD-206ENST00000497544 OR52A1Q9UKL2 312 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms