RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 FAM216AQ8WUB2 273 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
VTI1A-209ENST00000496445 SPTSSAQ969W0 71 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 TMEM246Q9BRR3 403 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 LRCH1Q9Y2L9 728 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 SAMHD1Q9Y3Z3 626 aaKnown RBP11.95□□□□□ -0.5
VTI1A-209ENST00000496445 FSTL3O95633 263 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-209ENST00000496445 ENTPD1P49961 510 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 SLC25A1P53007 311 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 ACTG1P63261 375 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 ARMCX4Q5H9R4 360 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 GLYATL3Q5SZD4 288 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 LINC01590Q5TEZ4 76 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 CELF2-AS1Q8N7Q2 184 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 OR2T33Q8NG76 320 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 DACT3Q96B18 629 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-209ENST00000496445 CCDC124Q96CT7 223 aaKnown RBP11.94□□□□□ -0.5
VTI1A-209ENST00000496445 ASB9Q96DX5 294 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 SSBP3Q9BWW4 388 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-209ENST00000496445 REEP1Q9H902 201 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 OR5V1Q9UGF6 321 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
VTI1A-209ENST00000496445 TMEM89A2RUT3 159 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 LRRC30A6NM36 301 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 CD300LBA8K4G0 201 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 TRIM77I1YAP6 450 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 ACOT8O14734 319 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 FAM20BO75063 409 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 FAM107AO95990 144 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 SPARCP09486 303 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 SLC2A1P11166 492 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 CA6P23280 308 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 CFPP27918 469 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 CD80P33681 288 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 PAX8Q06710 450 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 MPPED2Q15777 294 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 FAM98BQ52LJ0 330 aaKnown RBP11.93□□□□□ -0.5
VTI1A-209ENST00000496445 DRAM2Q6UX65 266 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 MRPL21Q7Z2W9 205 aaKnown RBP11.93□□□□□ -0.5
VTI1A-209ENST00000496445 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 IQCF1Q8N6M8 205 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 CCDC197Q8NCU1 140 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 OR10G2Q8NGC3 310 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 SPRYD4Q8WW59 207 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-209ENST00000496445 SLAMF6Q96DU3 332 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 JMJD8Q96S16 334 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 COPS4Q9BT78 406 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF69Q9UC07 566 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 PRPF19Q9UMS4 504 aaKnown RBP11.93□□□□□ -0.5
VTI1A-209ENST00000496445 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
VTI1A-209ENST00000496445 PKD1L1Q8TDX9 2849 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 IGHV2-70DA0A0C4DH43 119 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF593O00488 134 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 RAP2AP10114 183 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 CPT2P23786 658 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 FMO3P31513 532 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 PRKXP51817 358 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 UBA52P62987 128 aaKnown RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 OR8G1Q15617 311 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 LYPD2Q6UXB3 125 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 CD300LDQ6UXZ3 194 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 SPATC1Q76KD6 591 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 TMEM179BQ7Z7N9 219 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 SIGLECL1Q8N7X8 197 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 OR6K6Q8NGW6 343 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 ERGIC1Q969X5 290 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 ADAT1Q9BUB4 502 aaKnown RBP11.92□□□□□ -0.5
VTI1A-209ENST00000496445 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 MED20Q9H944 212 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 CMC2Q9NRP2 79 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 TAS2R1Q9NYW7 299 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 NUP50Q9UKX7 468 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 PPIAL4AQ9Y536 164 aa11.92□□□□□ -0.5
VTI1A-209ENST00000496445 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 FAM183AA6NL82 134 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF878C9JN71 531 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 IGHV4-38-2P0DP08 117 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF3P17036 446 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 GNB2P62879 340 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 DOK3Q7L591 496 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 OR56B2PQ8NGI1 322 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-209ENST00000496445 KCNJ15Q99712 375 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 SLC22A4Q9H015 551 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms