RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 C1orf229Q6ZS94 237 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-213ENST00000496347 IQCF1Q8N6M8 205 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF511Q8NB15 262 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 Q8TCH9 128 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 ZFAND2BQ8WV99 257 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 INTS14Q96SY0 518 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 KCNJ15Q99712 375 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 TOR3AQ9H497 397 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
HDAC4-213ENST00000496347 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-213ENST00000496347 LRCH1Q9Y2L9 728 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 TCRBV3S1A0A5B6 114 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 CD300LBA8K4G0 201 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-213ENST00000496347 XRCC2O43543 280 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 CLUP10909 449 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 RAD23AP54725 363 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
HDAC4-213ENST00000496347 TAF13Q15543 124 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 ESCO2Q56NI9 601 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 USP43Q70EL4 1123 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 RHOUQ7L0Q8 258 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 MOGAT3Q86VF5 341 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 SPATA24Q86W54 205 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 NANPQ8TBE9 248 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-213ENST00000496347 DNAJC9Q8WXX5 260 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 SLCO4A1Q96BD0 722 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
HDAC4-213ENST00000496347 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 MARCH7Q9H992 704 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 OR5V1Q9UGF6 321 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 TENM1Q9UKZ4 2725 aa13.21□□□□□ -0.29
HDAC4-213ENST00000496347 H0YL77 283 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 PRODHO43272 600 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 FKBP6O75344 327 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 AVPP01185 164 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 FSHBP01225 129 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 APOC1P02654 83 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 IRF2P14316 349 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 RPS2P15880 293 aaKnown RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 GSTT1P30711 240 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 PRSS12P56730 875 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 CBX1P83916 185 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 SRSF2Q01130 221 aaKnown RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF92Q03936 586 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 OR8G1Q15617 311 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 GLYATL3Q5SZD4 288 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 KLBQ86Z14 1044 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 OR11L1Q8NGX0 322 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 OR6N2Q8NGY6 317 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF420Q8TAQ5 688 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 RNF133Q8WVZ7 376 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-213ENST00000496347 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 DNAJB9Q9UBS3 223 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 POMPQ9Y244 141 aa13.2□□□□□ -0.3
HDAC4-213ENST00000496347 GGT3PA6NGU5 568 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 GMDSO60547 372 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 GLCEO94923 617 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 PTBP3O95758 552 aaKnown RBP13.19□□□□□ -0.3
HDAC4-213ENST00000496347 CYB5R3P00387 301 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-213ENST00000496347 HMGN1P05114 100 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 OSMP13725 252 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 ANXA8P13928 327 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 HSD11B1P28845 292 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 CX3CR1P49238 355 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 EIF2B1Q14232 305 aaKnown RBP13.19□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 DPY19L4Q7Z388 723 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 PAPD5Q8NDF8 572 aaKnown RBP13.19□□□□□ -0.3
HDAC4-213ENST00000496347 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 OR2AE1Q8NHA4 323 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-213ENST00000496347 SP140LQ9H930 580 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 OPN4Q9UHM6 478 aa13.19□□□□□ -0.3
HDAC4-213ENST00000496347 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-213ENST00000496347 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-213ENST00000496347 SLC2A1P11166 492 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF12P17014 697 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 ADRA2CP18825 462 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 CA6P23280 308 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms