RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 TMEM163Q8TC26 289 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 ITLN1Q8WWA0 313 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 SGK3Q96BR1 496 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 IL4I1Q96RQ9 567 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
SCAP-213ENST00000494938 YIPF3Q9GZM5 350 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 TOR3AQ9H497 397 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 S100A14Q9HCY8 104 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 TMEM100Q9NV29 134 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 N6AMT1Q9Y5N5 214 aa12.15□□□□□ -0.46
SCAP-213ENST00000494938 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 TGFAP01135 160 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 ALPLP05186 524 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 LYNP07948 512 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 ZNF16P17020 682 aaPredicted RBP12.14□□□□□ -0.47
SCAP-213ENST00000494938 TNFSF4P23510 183 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 CX3CR1P49238 355 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 RPS7P62081 194 aaKnown RBP12.14□□□□□ -0.47
SCAP-213ENST00000494938 BHLHE23Q8NDY6 225 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 MEGF10Q96KG7 1140 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 RAB3IPQ96QF0 476 aaPredicted RBP12.14□□□□□ -0.47
SCAP-213ENST00000494938 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 RIBC2Q9H4K1 309 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 NARFLQ9H6Q4 476 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 USE1Q9NZ43 259 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 WIPI2Q9Y4P8 454 aa12.14□□□□□ -0.47
SCAP-213ENST00000494938 PRR32B1ATL7 298 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 CLDN25C9JDP6 229 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 LMX1BO60663 402 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 HLA-DPB1P04440 258 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 MRPL3P09001 348 aaKnown RBP12.13□□□□□ -0.47
SCAP-213ENST00000494938 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 TNFRSF1AP19438 455 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 PMELP40967 661 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 CDH15P55291 814 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
SCAP-213ENST00000494938 NXNL2Q5VZ03 156 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 MRPL21Q7Z2W9 205 aaKnown RBP12.13□□□□□ -0.47
SCAP-213ENST00000494938 LINC01356Q8N9X3 169 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
SCAP-213ENST00000494938 RAB1CQ92928 201 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 UBE2FQ969M7 185 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 PRRG3Q9BZD7 231 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 TMEM160Q9NX00 188 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 JMJD1CQ15652 2540 aa12.13□□□□□ -0.47
SCAP-213ENST00000494938 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 F5H5P2 479 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 EI24O14681 340 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 APOC1P02654 83 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 ANXA2P07355 339 aaKnown RBP12.12□□□□□ -0.47
SCAP-213ENST00000494938 CA6P23280 308 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 HSD11B1P28845 292 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 FAM3AP98173 230 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 SLC3A1Q07837 685 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 FAM166AQ6J272 317 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 LRRN1Q6UXK5 716 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 PRIMA1Q86XR5 153 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
SCAP-213ENST00000494938 CBR4Q8N4T8 237 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 SIGLEC11Q96RL6 698 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 SLC29A1Q99808 456 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 HAO2Q9NYQ3 351 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 DNAJC27Q9NZQ0 273 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
SCAP-213ENST00000494938 LAMP5Q9UJQ1 280 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 COPS3Q9UNS2 423 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
SCAP-213ENST00000494938 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 XRCC2O43543 280 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
SCAP-213ENST00000494938 ROM1Q03395 351 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 ZIK1Q3SY52 487 aaPredicted RBP12.11□□□□□ -0.47
SCAP-213ENST00000494938 LCN1P1Q5VSP4 162 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 DEGS2Q6QHC5 323 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 OR52H1Q8NGJ2 320 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 TIMD4Q96H15 378 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 REEP6Q96HR9 211 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 SP140LQ9H930 580 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 ADGRL4Q9HBW9 690 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 BRD7Q9NPI1 651 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
SCAP-213ENST00000494938 LRP12Q9Y561 859 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 NPTNQ9Y639 398 aa12.11□□□□□ -0.47
SCAP-213ENST00000494938 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
SCAP-213ENST00000494938 SLC22A31A6NKX4 558 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms