RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MAGEA2P43356 314 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 HILS1P60008 231 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ACTG1P63261 375 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ZNF92Q03936 586 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 MPPED2Q15777 294 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 FAM98BQ52LJ0 330 aaKnown RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 ESCO2Q56NI9 601 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 OR2T5Q6IEZ7 315 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 LCN8Q6JVE9 175 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 LYPD2Q6UXB3 125 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 USP43Q70EL4 1123 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 KLBQ86Z14 1044 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 LNX2Q8N448 690 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ZDHHC22Q8N966 263 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 BOLLQ8N9W6 283 aaKnown RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 CCDC197Q8NCU1 140 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 OR2T4Q8NH00 348 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 OR2T29Q8NH02 315 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 GCDHQ92947 438 aaPredicted RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 DVL3Q92997 716 aaPredicted RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 SLAMF6Q96DU3 332 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ZNF799Q96GE5 643 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 LRGUKQ96M69 825 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 TMEM246Q9BRR3 403 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 THTPAQ9BU02 230 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 RBM4Q9BWF3 364 aaKnown RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 SUCNR1Q9BXA5 334 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 REEP1Q9H902 201 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ESM1Q9NQ30 184 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 TAS2R1Q9NYW7 299 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 ZNF69Q9UC07 566 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 INSIG2Q9Y5U4 225 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 SOX21Q9Y651 276 aaPredicted RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 PPIAL4CA0A0B4J2A2 164 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 FAM183AA6NL82 134 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 LRRC30A6NM36 301 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 CD300LBA8K4G0 201 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 IFNL4K9M1U5 179 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 FAM20BO75063 409 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 GRPP07492 148 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 SPI1P17947 270 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 CALB2P22676 271 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 CFPP27918 469 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 ENTPD1P49961 510 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 RAD23AP54725 363 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 GNB2P62879 340 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 OR8G1Q15617 311 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 ARMCX4Q5H9R4 360 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 KLF17Q5JT82 389 aaPredicted RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 GLYATL3Q5SZD4 288 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 SFRP4Q6FHJ7 346 aaPredicted RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 MRPL21Q7Z2W9 205 aaKnown RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 TMEM179BQ7Z7N9 219 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 ARHGAP24Q8N264 748 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 MUC20Q8N307 709 aaPredicted RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 IQCF1Q8N6M8 205 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 SIGLECL1Q8N7X8 197 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 OR2T33Q8NG76 320 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 OR10G2Q8NGC3 310 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 OR6K6Q8NGW6 343 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 FAM216AQ8WUB2 273 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 CCDC124Q96CT7 223 aaKnown RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 DUX5Q96PT3 197 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 KCNJ15Q99712 375 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 NIPSNAP1Q9BPW8 284 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 COPS4Q9BT78 406 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 MRI1Q9BV20 369 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 CHID1Q9BWS9 393 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 SSBP3Q9BWW4 388 aaPredicted RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 MAGIXQ9H6Y5 334 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 MIOXQ9UGB7 285 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 OR5V1Q9UGF6 321 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 KCNG2Q9UJ96 466 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 NUP50Q9UKX7 468 aa8.03□□□□□ -1.12
MSH5-218ENST00000494646 POLR3KQ9Y2Y1 108 aaPredicted RBP8.03□□□□□ -1.12
MSH5-218ENST00000494646 TMEM89A2RUT3 159 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 H3BN98 237 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 GNGT2O14610 69 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 TBX1O43435 398 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 FAM107AO95990 144 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 CST1P01037 141 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 FSHBP01225 129 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 POU1F1P28069 291 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 CD200P41217 278 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 PAX8Q06710 450 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 POU4F2Q12837 409 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 EIF2B1Q14232 305 aaKnown RBP8.02□□□□□ -1.13
MSH5-218ENST00000494646 ZNF404Q494X3 552 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 DRAM2Q6UX65 266 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 ZNF826PQ6ZT77 177 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 DPY19L4Q7Z388 723 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 ERI1Q8IV48 349 aaKnown RBP8.02□□□□□ -1.13
MSH5-218ENST00000494646 C1orf87Q8N0U7 546 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 OR11L1Q8NGX0 322 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 GIPC3Q8TF64 312 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 ZFAND2BQ8WV99 257 aa8.02□□□□□ -1.13
MSH5-218ENST00000494646 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.13
MSH5-218ENST00000494646 FEVQ99581 238 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms